Helobdella robusta: HELRODRAFT_177311
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Entry
HELRODRAFT_177311 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K23195
transcriptional repressor CTCF
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hro03000
]
HELRODRAFT_177311
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_177311
Transcription factors [BR:
hro03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HELRODRAFT_177311
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
HELRODRAFT_177311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_11
zf-C2H2_ZNF462_1st
zf-met
zf-C2HE
CENP-B_dimeris
zf-C2H2_jaz
Autophagy_act_C
FAM176
TFIIIA_zf-C2H2
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
20206174
NCBI-ProteinID:
XP_009023772
JGI:
Helro1_177311
UniProt:
T1FBH5
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MDEQDIESYLVNFNHGMSDDLPNSGNTSSFLYTSNNILSNSDDIYNELQQKQCSTELVTN
DITQHDDDDETSQDDEIQTEENTILPPQQQDASGEASNFQTVTLVPSEIDPDGEMRYMLI
VTNNENDNGGAYVNDESAPKQIVLPQNGMSVFDFDEDCNANITANKSKNQTKDDGEDENE
EEDDEDKEDDDEEDDDDEEDDEVIKLLNASVEKVSGPILKCNYCSYMTTKRFQLIRHLRS
HSDDRPFKCEFCALAFKSRVTLNNHTNTHKGVRPNKCKECEACFTTTGELIRHVRYRHTY
EKPHRCTVCNYASVELSKLRRHVRSHTGERPYKCPECPYASPDTFKLKRHLRVHTGERPY
VCDICEMRFTQSNSLKSHRLIHTGARPIFRCELCPSTCTRKTDLRNHVLRIHTSDKPLLC
KKCGKNFPDRYTYKVILACC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaagacattgaaagttatttagtaaacttcaatcatggaatgtctgatgat
ctgcctaactcaggcaacacctcatcatttctctacacatctaacaatatcctctcgaac
agcgatgacatatacaacgagttacaacagaaacagtgctcgactgaactggtaaccaat
gatatcactcaacacgatgatgatgatgaaactagtcaagatgatgaaattcagacagaa
gaaaatacaatcctacctccccaacagcaagatgcgagtggcgaagccagtaattttcag
actgtgacgttggtgccctctgaaatcgatccagacggagagatgaggtacatgctaatt
gtcactaacaacgagaatgacaatggtggtgcatatgttaatgatgaaagtgcccccaaa
caaatcgttcttccccaaaatggtatgtctgtctttgactttgatgaggattgtaatgcc
aacatcacagctaataaaagcaaaaatcaaacaaaagacgacggtgaagatgagaatgag
gaagaggatgatgaagataaagaggatgatgatgaagaagatgacgatgatgaagaagat
gatgaagttataaaattattaaatgcttctgtagaaaaggtatctggcccaatcttgaag
tgtaattactgctcctacatgacgacgaaacgatttcaactgatcagacatttgcgctcg
cactcagatgacagacctttcaagtgtgaattctgtgccctggcattcaaatctcgagtt
acactaaacaaccacactaacactcacaaaggagtgcgacctaacaagtgcaaggagtgt
gaggcctgtttcacgaccactggagaactaattaggcacgttaggtacaggcacacttat
gagaaaccacacaggtgcacagtctgcaactacgccagtgtcgagttgagcaaacttcga
cgacacgtacgatcccacacaggagaacgaccctacaagtgccccgagtgtccttacgca
agccccgatacgttcaaacttaagagacatctcagagtacatactggggagcgcccgtat
gtttgcgacatctgcgagatgagattcacgcagagtaacagcctcaaatcacataggctt
attcataccggggctagaccaatctttcgctgtgaactctgcccgtcaacgtgcactcga
aagactgacctacgaaaccatgttcttcgcattcacacaagtgacaaacctttactctgc
aagaagtgtggaaaaaattttcctgatcgatacacatacaaagtaattttagcttgttgt
taa
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