Helobdella robusta: HELRODRAFT_177713
Help
Entry
HELRODRAFT_177713 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_177713
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_177713
Spliceosome [BR:
hro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
HELRODRAFT_177713
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
HELRODRAFT_177713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
RRM_occluded
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
20206394
NCBI-ProteinID:
XP_009024121
JGI:
Helro1_177713
UniProt:
T1FC45
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MSGFQYGYIYRHKTKRERERIREATAASVAPSSDGVIDDVEMREAGPGDTIRRGNDEQIQ
AAPNNHVDANDDEDDDQDSEDDNQDGEDEDQDDDDDDDDGGTGDNRHASAAADDEVHCGW
GEMEVEMEAERQRKLAEEEEMKQNILLKEAETLEDNVKSNLYNYEHHLNLITVLRKLKST
DALRAARERMSKIFPLTDKIWLEWFNDEMEANPDEINEYSEMHEISADEYHYRLSILKRA
VEDYDSVKLWMAMILFHSKVLPPTTDKEFKDEYEEMLNIDLMRKTFEEAIKRVGHHADAD
QLWTEYLDFEENVLHYLKLAHQSATDGEDTFATIRYSASVAAINAAAAAVATTTDATVAT
SPATAATTSVNLTPEAVAFAAEAAEASKERLNGIQEQKRIIKKVFLKIMSIPKMNLVHFN
LRYMRWCEGKRRTPPVDEAARERRGYSGFIESARRFVAAEMALLKAGIRKPKFDYEESEV
DRIADDELDFQLLDAFRSSFSLVGELCVHERKLEEKNTVENYEALINFLKLSSTGEYVRA
AYERLVIQDKDRDSMNKNKEGVSSNDDVNVTKDSEKDENLEYLLRTYRRSVRNCSWCVDL
WIGYIRTVEKIKLEHQNIKKIFNEALTVGFAQPYEYLNLWTAYIDYLRRRIDWSKGHESE
LEDLRDAFDNATNQLFQSFGMKGDPTCSLLQYRAFIENSQYNHCSNINLDLCIFDACIVL
MSGGDLRQFEEALLKCEAHLKRASERKKKTENASPKNKKNLNNSNSSNSNNKKSETNGKH
KQQQQPGCSNWRETQQQQQQQQSKLTPNQKFMEEVELLQEELRQQYGGKAAEAKRANTKS
NNNSNNKNNNNKNNNNNNNKRDGVRPYVRARPKVYVRGQIDTVIDNDGFRVPSLPPSLSS
SSSSLSSTSLSAPPSSLPTPPPSSSLPSSSSSSSAPPPGYNKKRGRGNDEDDGENVVADE
AAATASAAKRFKGMLEQSSSSSPQPSSSSSSSQPSSSSSQPQSSSSSAEEFTVFVSNLDF
SLGVEDIRNVFSEFSTSLEKNKLFIKNLSFETTKETLVALFEPIGQLKDVRLVTYHNGNS
KGLAFVEYADENLAAKALMKLDGYNLDGRAIAVSFSNPPQRNSPLALEGGNKTSWGYCQN
SVAAVAKKLEEGIHK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctttcaatatggctatatttaccgtcataaaacgaaaagagaaagggaaaga
ataagggaagctactgctgcttctgtcgctccatcttcggatggtgtcattgacgatgtt
gaaatgcgcgaagcgggcccaggtgatactattagaaggggaaatgacgaacaaatacaa
gcggctcctaacaaccatgttgatgctaatgatgatgaggatgacgatcaagatagtgaa
gatgacaatcaagatggtgaagatgaagatcaggatgatgacgacgacgatgacgatggt
ggtactggcgacaaccgccatgcatctgctgctgctgatgatgaagttcattgtggttgg
ggagagatggaggttgagatggaggccgaaaggcagaggaagcttgcagaagaggaggaa
atgaaacaaaatattttgctgaaagaagcggaaactcttgaagataatgtcaaatcgaac
ctctacaactacgaacaccacctaaacttaatcacagttctgaggaagctgaaatcgacg
gatgcactgagggcagctagggaaagaatgagcaaaatattcccactaaccgataaaatc
tggttggagtggttcaacgacgagatggaggcgaaccccgacgaaataaacgagtactcc
gaaatgcacgaaatcagtgcggatgagtatcattatcgactgtcgatactgaaaagggcc
gtcgaagattacgactccgtcaaactctggatggccatgatcctattccactcgaaggta
ctcccacctacgaccgacaaagaatttaaggacgagtacgaagagatgctgaacatcgat
ctgatgaggaagacttttgaagaagcgatcaaaagagtaggtcaccatgccgatgccgac
caactctggactgagtatctggactttgaggaaaacgtactccactatttgaaactcgcc
caccaaagtgcaactgatggagaagatacttttgctactatcagatattctgcatccgtt
gctgctataaatgctgctgctgctgctgtggctactaccacagatgccacagttgctact
tctcctgctacagctgctactacttctgttaaccttacccctgaggctgttgcatttgcg
gcagaggcagctgaagcttctaaagaacgactgaatggaattcaggaacagaaaagaata
atcaagaaggttttcttgaagattatgtccataccaaaaatgaatctggttcatttcaac
ttgcgctacatgcgttggtgcgagggcaagcgaaggaccccccctgtggacgaggcggcg
agagagaggcggggctacagtggcttcattgagtcggccagacgcttcgtagcggctgag
atggcccttctcaaggcagggatcagaaagccgaaatttgactatgaggaaagtgaagtt
gatcgaatcgctgacgacgagctcgactttcaactcttggatgcgttcagaagttccttc
agtttagtgggcgaactgtgtgttcatgaacgaaagctagaagagaaaaacacagtggaa
aactacgaagcccttatcaactttttgaaactgagctcaacaggcgagtacgtcagggca
gcatacgagaggctcgttattcaggacaaagaccgcgatagcatgaataaaaacaaagaa
ggcgtcagcagcaatgatgacgtcaatgtcaccaaagacagtgaaaaagatgagaatctg
gagtatttgttgagaacgtacagacgttcggtccgtaactgttcctggtgtgttgatctc
tggattggctacattaggacagttgagaagatcaaactggaacaccaaaatattaaaaag
attttcaatgaagccctcaccgttggctttgcccagccttatgaatatttaaatttatgg
actgcgtacattgattacctgagacgacgcatcgattggtcgaaaggccacgaatcagag
ttggaagatttgagagacgcctttgacaatgcaaccaatcagctctttcaatcttttggt
atgaaaggtgatccaacttgcagtctattacagtacagagctttcatcgagaacagtcag
tataatcattgttcaaatataaatttagatttatgtatttttgacgcttgtattgtcttg
atgtcaggaggtgacctgagacagtttgaagaggcgctgctaaagtgtgaggcacacttg
aagagagcttccgagaggaagaagaaaactgaaaacgcatcaccaaagaacaaaaagaac
ctcaacaacagcaacagtagcaacagcaacaacaaaaaatcggagacaaatggcaaacat
aaacaacaacaacaaccgggctgttcaaactggcgggaaacccaacaacaacaacagcag
cagcagtctaaactaactcctaatcagaagttcatggaggaggttgagctgcttcaagag
gagttacgacagcagtatggtggaaaagctgctgaagctaaacgcgccaatacaaaaagc
aacaacaacagcaataataaaaataataataataaaaataataataataacaataataaa
agagatggagttagaccgtacgtaagagcgaggccgaaagtgtacgtcagaggacagata
gatacagttatagacaacgacggcttccgagttccatctcttcctccctccctatcatca
tcgtcgtcgtcactttcatcaacatcactatcagcaccgccatcatcattaccaacacct
ccaccatcatcatcattaccgtcatcatcatcatcatcgtcggctccgccgcctggctat
aataagaagcgtggcagagggaacgatgaagatgacggcgaaaatgttgtggctgatgaa
gctgctgctaccgcttctgctgctaagagatttaaaggaatgcttgaacagtcatcatca
tcatcaccacaaccatcgtcgtcatcatcatcatcacaaccatcatcatcatcatcacaa
ccgcaatcatcatcatcatcggctgaagaatttactgtgtttgtcagcaatttggatttc
tcgcttggagtagaagacattagaaatgttttctctgagttcagtacaagtttagagaag
aacaaactgttcattaagaatctatcgtttgaaacaaccaaggaaacactcgttgcactc
tttgaacccatcggccagttgaaagacgttagactagttacataccataacggtaattcc
aaaggcctggcattcgttgaatatgctgatgagaatcttgctgccaaggccctaatgaaa
ctagacggatacaacttagacgggcgagcgatagccgtttcatttagtaaccctcctcag
aggaatagtccacttgcacttgaaggagggaacaagacgtcgtgggggtactgccagaac
tcagttgcagctgttgccaagaaacttgaggaaggaatccataaataa
DBGET
integrated database retrieval system
