Helobdella robusta: HELRODRAFT_178411
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Entry
HELRODRAFT_178411 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K16498
protocadherin delta 1
Organism
hro
Helobdella robusta
Pathway
hro03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
HELRODRAFT_178411
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hro01009
]
HELRODRAFT_178411
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hro04515
]
HELRODRAFT_178411
Protein phosphatases and associated proteins [BR:
hro01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
HELRODRAFT_178411
Cell adhesion molecules [BR:
hro04515
]
Cadherins
Protocadherins
HELRODRAFT_178411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
20206748
NCBI-ProteinID:
XP_009024754
JGI:
Helro1_178411
UniProt:
T1FD49
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MHNIGQIPKNRNEMGHHKSLILTFFIILWGFAKFSIPISTRNEMALTFEFEEELPLQSHI
GDVLNQLRKSYTNPNLNFKFQILQDSNHSSLFAIDNSKGVLRTVGRIDRETICPSFTDDT
CTVNLKIIVSGSTNPFIVEVELVITDINDHTPTFNSNVMDISVFENAPLGSMFPIPIAID
HDSRQNSVRFYELLNASYVPFSLEQDEHKYTGRINSIQDSSLSLKLEQLLDRESVETIQL
MITAVDGGMSPRTGTLIINVNVQDINDNKPIFERYQYNISLDEETSYRKPVLKVRATDGD
AGVNGKVMYELSRPSQTLYSSLFKINAESGELTVKSKLDFESRPSYTIEVIARDGGVNQL
TGITLIQVTVIDLNDNSPTISLTSIDGNQTNRIIVGENLEHPYTFAFISVKDLDVGLNGV
CQCRLETFSETFNLAHLYETIYSLGTKTKLDRENVASYHVIVTCWDAGRPSQNSSLQILV
EVSDENDNAPYFVKHSFQARVDENSKESTAITRISAYDLDVGANAETRYKIQNDTVSNLN
YVKLDEVTGWLTAGARQFDHEDFKKFNFTVVAFNVQNPALYSLADVSIEIIDLNDQPPIF
ESDVIKYRILENQTVGISISTIETIDLDQDEKFQQSKYRLSCCDDYNDYESSCYFEKSID
KNTVLYSANILKEYFESNILSDLVTIDELTGELKSNAIFDRERDSTINFCIIATNLAHPY
FSSTAQVTIEIDDVNDNPPIIVFPKFDYILEVSSWTEENEILMKIFAEDPDKNETNSLLS
YHPIFSIEDKENRNVTIANHDVLNNNEDDELKPTNLNLNVNDLFAINRYTGEIRLTRFLR
DTDFWNNCTFIFRFSVNDSGSPNQKTEGSFTIHIHSDEDFKLRDFRRQNHFSKFVNNYKN
LFLLLVLCSSSFLLIVVLTITICYTKWRMRKSRRPLKESKIPPAVYLVNIAEKEIQEKHP
VKKNSNHTGYRPHYRHQLQNSPSSDSGRGQSEVAADVIMMMADKNLVSKTHAQPLFQQTY
EPKASNLLENGIFCKRGYEFLEAHHIALNNNSNNRSCISNSSRCFDDVNLTETFI
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgcataacataggccaaataccgaagaaccgaaacgaaatgggtcatcacaagtccttg
attctaacatttttcattatattgtggggctttgccaagttttcgattccgatatccaca
cgaaacgaaatggctttgacatttgaatttgaagaagagttaccactacaatcgcatatc
ggagatgtgctaaatcaattaaggaaatcctacactaatcctaatttaaattttaaattt
caaatcttgcaagattccaatcattcttcgctatttgcgatcgataattcaaaaggcgtc
ctaagaacagtaggaaggatcgatcgagaaactatttgcccatcttttaccgacgatacg
tgcacagtgaatttaaaaataatcgtatccggctcgactaaccctttcatcgtagaggta
gagctcgtaattaccgacataaacgatcacacaccaaccttcaactcgaatgtcatggac
atatcggtattcgagaacgctcctctcggcagcatgttccccataccgatcgccatcgac
cacgacagcaggcagaactcggtacggttttacgagttgctgaacgcttcatacgtacca
ttttcattagagcaagacgaacataaatataccggtcggataaattcgattcaggacagt
tctctctcgttgaaactcgagcaacttttagatagagaatctgtcgaaactatacaatta
atgataacggcggtagatggagggatgtcacctagaaccggtacgttgataattaacgtt
aatgtacaagacatcaacgataacaaaccgatattcgaacggtatcagtacaacatcagt
ttagatgaagaaacttcttatagaaaaccggttttaaaagttcgtgccaccgatggcgac
gctggagtgaatggaaaagtgatgtacgaattgtcgcggccaagtcaaacattgtatagt
tcactttttaaaattaacgcagaatctggcgagttaacagtaaaaagtaaactcgatttc
gaatcgagaccctcgtacacaattgaagtaatagcgagggatgggggtgtcaaccagcta
accggtattacgctaatccaggtaacggtcatcgatctgaacgataattctccgacaatt
tcgctaacttcaatcgacggcaaccaaacgaatcgaataatcgtcggcgagaatttggaa
catccctacacatttgcctttataagcgtcaaagatttagatgttggcctgaacggtgta
tgtcaatgcaggcttgaaacgttctccgaaaccttcaacttggcccatctctacgaaact
atctattctctgggaacaaaaacaaaactggatcgagaaaatgttgcgtcgtatcacgtg
attgtaacctgctgggatgctggtagaccttcacaaaactcgtccttgcaaattttagtc
gaggtttccgatgaaaacgacaacgccccctacttcgtcaagcactcattccaggcccga
gttgatgagaacagcaaggaatcaacggcaataacgcgaatttcagcctacgatctagac
gttggcgccaacgctgaaactagatacaagatacagaatgatacggtatctaatttgaat
tacgtcaaacttgatgaggtcactggatggttaacagctggcgctcggcagtttgatcat
gaagatttcaaaaagtttaattttacagtagtggcatttaacgttcaaaatcctgcctta
tactcccttgcagatgtcagcatcgagataatagatttaaatgatcagcctccgattttt
gaaagtgatgtgataaaatatcgaattttagagaaccaaaccgtcggtatttcgatatca
acaatcgagacaattgatttagaccaagatgaaaaatttcaacagtctaaataccgtttg
tcatgctgtgacgattacaacgattacgagtcttcctgctattttgaaaaatcgatcgac
aaaaatacggtgctgtacagtgctaacattttgaaagaatatttcgaatcgaatatttta
tcggatctcgtaactatcgacgaattaacgggagaactaaaaagtaacgcgatatttgat
agagaacgagattcgacgattaatttttgtatcatcgcaactaatctagcacatccttac
ttcagctcaacagctcaggttactatagagatagatgacgtcaacgacaatccaccaatc
atcgtctttcctaaatttgattacatcttagaggtgtcttcatggacagaggaaaatgaa
attctcatgaaaatattcgccgaagatccggataaaaacgagaccaactctctactatcg
tatcatccgattttcagtattgaagataaagagaacaggaatgtaacaatagctaaccac
gatgttttaaacaacaacgaagacgacgaattaaaacccacaaacctaaacctaaacgtt
aacgatctattcgctattaatcgatacaccggagaaatacggttaacgcggtttttaagg
gataccgacttttggaacaactgcacattcatattccggtttagcgtcaacgattccggc
agtcccaatcagaagacggaaggaagtttcacgatccacattcactccgatgaggatttc
aaattgagagattttcgtcggcagaatcatttttcaaaatttgtaaataattacaaaaat
ttgttcctattattagttttgtgttcgtcttcgtttctgctaatcgtcgtactgacaatt
acgatctgctacacaaaatggcgaatgagaaaaagtcgtcgcccattgaaagaatcgaaa
atcccgccagctgtttacttggtaaacatagcggaaaaggaaatccaagaaaaacatccg
gttaagaagaacagtaaccacaccggctaccgaccgcactaccgccaccaacttcaaaat
agcccatcctcagatagcggaagaggccagagcgaagtcgccgctgacgtcataatgatg
atggccgacaaaaatttagtaagtaagacacacgcgcagccattatttcagcaaacgtac
gagcctaaagctagcaatttactggaaaatggaatattttgcaagcgaggttatgagttc
ttggaggcccatcatatagcgcttaacaataatagtaataacagaagttgcatcagcaat
agtagcaggtgttttgacgacgtcaatcttacggaaacattcatttga
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integrated database retrieval system
