KEGG   Helobdella robusta: HELRODRAFT_178666
Entry
HELRODRAFT_178666 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_178666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_178666
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    HELRODRAFT_178666
 Complex C
   U5 SnRNP specific factors
    HELRODRAFT_178666
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF4 eIF2A WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_SCAP Nbas_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 20206890
NCBI-ProteinID: XP_009025006
JGI: Helro1_178666
UniProt: T1FDJ1
LinkDB
Position
Unknown
AA seq 315 aa
MDLKRKAMEDELAIVPVKKTKTDIVGFGTQVNNAIELLGGIKRTSKLHAPIMLLTGHESE
IYCCKFSPSGKFLVSAGTDRMILLWNVYGTCDNIATLKEHSNAIMDLHFTTDGCQMLTCS
ADKTLTLWDAECATRIRKFKGHQTFVNACDVSRRFPKYLCSGSDDGTVRIWDSRLKKSIL
TFQNTFQIMSGHMDTVTGMRLSPDGSYLLSTAMDNTVRIWDVRPYAPQERCVKIFQGNQH
TFEKNLLRVSWSPDGTKIAAGSGDRMVYIWDTTTRRILYKFPGHGGSVNEVDFHPLEPII
CSGSSDKQIYLGEIE
NT seq 948 nt   +upstreamnt  +downstreamnt
atggatctgaaaagaaaagctatggaagatgaattggccattgttccggtaaagaagact
aaaactgatattgttggctttggcacacaagttaacaacgccatcgaactcttgggcgga
atcaagcggacctcaaaactccatgccccgatcatgttactgacgggacacgaaagtgaa
atttactgttgcaaattttctcctagtgggaagttcttggtttcagctggcacagatagg
atgattttgttatggaatgtgtacggaacctgcgacaacatagcaactctgaaagagcac
agcaatgcaattatggatttgcattttactaccgacggatgccagatgcttacatgttca
gcggacaagactttaactttgtgggatgcggagtgtgccacgagaatcaggaagtttaaa
ggacaccagacgttcgtgaatgcttgcgatgtgtcgaggagatttccaaagtatttgtgc
agtggtagcgatgatggcactgttaggatctgggactcaaggctcaagaagtcgatccta
actttccagaacaccttccaaatcatgtcgggtcacatggacacggttacgggaatgagg
ctgagccctgatgggtcctatttgctctccactgctatggataatacggttaggatatgg
gatgtcaggccgtatgctccccaagaaagatgtgttaaaatctttcagggaaaccagcat
acatttgaaaaaaatttactccgcgtttcgtggagcccagatggcactaagatagcagcg
ggatcaggggataggatggtctacatttgggatacgacgacgagaagaatactatacaag
tttcctggacatggaggatcagttaatgaagtagatttccatccacttgagccaataatt
tgctctggatcgagtgacaagcagatttacttgggtgaaatcgagtaa

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