KEGG   Helobdella robusta: HELRODRAFT_179231
Entry
HELRODRAFT_179231 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
hro  Helobdella robusta
Pathway
hro04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    HELRODRAFT_179231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hro04121]
    HELRODRAFT_179231
Enzymes [BR:hro01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     HELRODRAFT_179231
Ubiquitin system [BR:hro04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    HELRODRAFT_179231
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     HELRODRAFT_179231
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 zf-C3HC4_2 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 zf-C3HC4 WDR55 EIF3I Beta-prop_TEP1_C zf-RING_UBOX zf-RING_2 Beta-prop_RIG_2nd zf-C3HC4_4 zf-RING_5 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st zf-RING_10 WD40_RFWD3 Beta-prop_DCAF12 RING_XB3-XBAT31 zf-C3HC4_3 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_like WD40_MABP1-WDR62_1st PEP5_VPS11_N TRAF3_RING zf-Nse Beta-prop_NUP159_NUP214 Beta-prop_SCAP Sina_RING WDR90_beta-prop_4th zf-rbx1
Other DBs
NCBI-GeneID: 20207192
NCBI-ProteinID: XP_009026337
JGI: Helro1_179231
UniProt: T1FEE3
LinkDB
Position
Unknown
AA seq 407 aa
MSSRTEPVLKRKRLNPAVCGGITDSFKTTEDCYSCPICFNILDEPYMTKCGHSFCYRCIG
HSLENDNRCPKCGFIIARKEEIFPNFLREFEVRWKDDNDDGDIDNKDDGDNGDIDNKDKD
DYDDDADIEDDKEDDDDDDVGIRDLTLPHTPPDFDLDTMDLDRVNDLLNSLYDRRQQLQQ
QQRKDSNELLREFLEKALAQKQKHEKRCWSVDFNRVDPCLLASGSDDAKVKLWHINSANS
IASLQVRANVCGVKFNPDSLYHLAFGSADHRIHYYDLRQMKEALLTLKGHKKAVSYAKFI
NSNEIVSASTDSQLKLWDLTKKCCTRTYLGHINERNFVGLATDGDYVACDISKAMLSYKF
DPLRTVLMGDKIEDESTEFVSAVCWKTGSNVILAANSQGHIKVMSRT
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgtcgagtcgaacggaaccagtcttgaagaggaagaggttgaatccagcggtctgtggt
ggcatcaccgattccttcaagaccactgaggactgttattcttgccccatctgcttcaac
atacttgatgagccctacatgactaagtgtggacacagtttctgttataggtgcattggt
cactctctggagaatgacaataggtgcccaaagtgtggattcatcatcgccaggaaagag
gaaatcttccctaacttcctgcgtgagtttgaagtgcggtggaaagatgataatgatgat
ggtgatattgataataaagatgatggtgataatggtgatattgataacaaagataaggat
gattatgatgatgatgctgatatagaagatgataaagaggatgatgatgatgatgatgtt
ggcataagagatttaacactgccccacaccccgccggacttcgaccttgacactatggac
ctagacagggtgaatgacctgttgaactccttgtacgataggaggcaacagttacagcag
caacaaaggaaggatagcaatgaactacttagagagtttttggaaaaagcacttgctcag
aagcagaaacacgagaagagatgctggagtgtggacttcaacagggtagacccatgtctc
ttggcgtccggatcagatgatgctaaggtgaagttgtggcacatcaactcggccaactcc
atcgcctccctccaagtacgtgccaacgtctgtggggtcaagttcaatccagacagtctc
taccatctggcgtttggttctgctgaccaccgcatccactactacgacctccgccagatg
aaggaagctcttctcacgttgaaaggacacaagaaggcagtgtcttacgccaagttcatc
aactccaacgagatcgtctccgcttcgaccgatagccagctgaagttgtgggacctgacg
aagaaatgctgcactcgtacctatcttggtcacatcaacgaaaggaacttcgtcggattg
gccactgacggagattatgtagcttgtgacatctcgaaagctatgctctcatacaagttc
gaccctcttaggactgtcctaatgggtgacaaaatagaagatgagagtacggagttcgtc
agtgcggtctgctggaagactggatcgaacgtcatcttggcggcaaacagtcagggacat
atcaaggttatgagtcggacttaa

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