Helobdella robusta: HELRODRAFT_179689
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Entry
HELRODRAFT_179689 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K16499
protocadherin delta 2
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hro04515
]
HELRODRAFT_179689
Cell adhesion molecules [BR:
hro04515
]
Cadherins
Protocadherins
HELRODRAFT_179689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
TMEM154
DAG1
RIFIN
Cadherin_2
Orf78
DUF6548
KIAA1549
PRIMA1
Motif
Other DBs
NCBI-GeneID:
20207412
NCBI-ProteinID:
XP_009026754
JGI:
Helro1_179689
UniProt:
T1FF13
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MVYYPVPWLSVNLCARRENEGELSTIVPLTIYYRLVKAPLSFLVRIFSPFFNNNLEEDWH
QFWRTTQETEDTYHFAFVEWTTNDQRWVVVGVSTFHDVSGKIHVLGACQMMVGAMELLEK
SPPYTFIGNIKNLALNLASPPLTQRQQQLLRFTINSKLSTSDFSSKPSEDFLLNETSGVL
TSKKSFDRDWLCPFADRCESQLEIQITPIEYYQLISITVQLIDINDHAPAFQTNQSYLTL
TNDMQKGLLLNIPEALDLDSGIFGIQGYQIVSSDVSSAFSINVTKLGDGSLHPALKLTKS
VRLNNNNNNNNNNNNNNNNNNDNDYFIFPKNFRIEIVAFDGGEPPRTGSLTIYVSVLAVS
IQANVALLKFDSGLYNISVEEDGPTDYPIVTVSAHLVYGDGSGDVKIGYWIVDDGVNPCA
KYFKIDSMSGLITTTNFTLDYELTHLCSFKVSASPISLASSLIYNVTTKVVVNVLNLDDN
PPIVAVINPVGQGDLKVKCGSESGVHLTYLMLTDLDDDGSNEGGGNENSCVIDGEYIASS
SSSSSSSLETLPSLSLFRLVSVSTDYRLVTSTNFPTYPFPFRSNITVNITCKGNNSNGSS
TSLKIKLSIIPSGPVFSQKYLVIQISNSDQNRIGYPVVTSLNVTTNDSNVTLRYSILPLN
NSDGLIVDSKLGIVSVNKVFTTISSSSSSSGSSSSSGSSSSSSTCYAYNVSVAYEEDDKY
IDRMQLCLQPRPTTATSTTTSTNSNTPAHANSNNNITSTTNNVSDNNSSNNSNNNNNTWV
IITSVVCGTVVAIVIVVVVAVIIICCRISERKEKVNLANARSVSSALPLTLETGSYLSGT
NLNGPYLSGSCLNGSLTDFTRPERAGSVTLSDSELIVRPIVDGVKV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtttactatccggtgccctggctgtcggtgaacctctgtgcaaggagggagaatgaa
ggggaactttcgactatcgtaccattaacaatttattatagattagttaaggcaccgcta
agctttctagtgagaattttctctccattcttcaacaacaatctcgaggaggactggcac
cagttttggaggacaacgcaggaaacggaagacacttatcattttgcctttgtcgaatgg
acgacgaatgatcagaggtgggttgtggtgggagtcagcacgtttcatgatgtatccggt
aaaattcatgtcctcggtgcgtgtcagatgatggtcggtgcaatggagttattagaaaaa
tcaccaccctacacattcattggcaacatcaaaaatttggctttgaatttggcctcacct
cctcttacccaacggcaacaacaactgttgagattcacaatcaactccaaattgtcaact
tctgacttcagctcaaagccaagtgaagactttttactaaacgaaactagtggagttttg
accagcaaaaaatctttcgatcgtgattggctgtgtccatttgctgaccggtgcgagagc
caattagaaattcagataacgcctatagaatattaccagctgattagcataactgtccag
ttgattgatataaatgaccacgctcctgccttccaaaccaaccaatcatatctcactctc
actaatgatatgcaaaaaggtctacttttaaatataccggaagcattagatttagactca
ggcattttcggcatacaggggtaccaaattgtatcctctgacgtatcatcagctttcagc
attaacgtaactaaattaggtgatggctctctacacccagctttaaagcttactaaatcg
gtcagacttaacaacaacaacaacaacaataataataataataataacaataataataat
aacgataacgattattttatatttccgaaaaacttccgaatagaaatagtagcattcgac
ggcggagaaccgcctagaaccggttccctaacgatatacgtttcggtattggccgtctcg
attcaggccaacgtggccctgttgaaattcgattccggcttgtataatattagcgttgaa
gaggatggaccgactgattatccgatagttacggtttcggcacatctggtgtacggagat
ggcagtggagatgtgaaaatcggctactggatagtcgacgatggagtcaacccgtgcgct
aaatatttcaagattgactccatgagcggtcttataaccacaaccaacttcacgctcgat
tacgaactcacgcacctctgttcgttcaaagtttccgcctcgcccatctcccttgcatca
tccctaatctacaacgtcactaccaaagttgtggtcaacgttctaaacttagatgacaat
ccgccgatcgtagccgttataaatccggtaggtcaaggtgatttgaaggtcaaatgcggg
tcggagtcaggagttcatctgacgtatttaatgctgaccgatctggatgatgatggttca
aacgaaggaggaggaaatgagaattcttgtgtgattgatggagaatatatcgcatcatca
tcgtcgtcgtcatcatcatcacttgaaacattaccatcgctatccttgttcagactagta
tccgtatctaccgactatcgattagttacatccacaaactttcctacttacccatttcca
ttccggtcaaatattaccgtgaacattacatgtaaaggaaacaacagtaacggttcaagt
acatctctaaaaatcaaattgtcgattataccgtcaggtccggtattcagtcaaaaatat
ttggtgattcaaatctcaaatagcgatcaaaaccgtatcggttatccggttgtaacatct
ttgaatgtaaccactaacgattctaatgtaacactgcgatactcaattttacctttgaat
aatagcgatgggttgatcgtagactcgaagctcggtatcgtctcggtaaataaagtgttt
accactattagtagtagcagcagtagtagtggtagtagcagtagtagtggtagtagcagt
agtagcagcacttgctacgcttataatgttagtgtggcttacgaagaagatgataaatac
atcgaccgcatgcaactctgtttgcagccacgaccaacaacagcaacatcaacaacaaca
tcaacaaattcaaacacaccagcacacgccaactctaacaacaacataacatcaacaaca
aacaacgtttcagacaacaacagcagcaacaacagcaacaacaacaacaacacatgggta
ataataacatcagtagtatgcggcacagttgttgctatcgtcatcgttgtggtcgtcgcc
gtcatcataatttgctgccgaatttcagaacgaaaagagaaagttaaccttgcgaacgcg
cgttcagtttcttccgctctgcccttgaccttagaaactgggtcctacttatctgggacg
aatttaaatgggccgtatttatctgggtcatgtctaaatgggtcactgaccgattttaca
aggcccgaaagagctggttccgtgacgttgtcagatagtgaattgattgtcagaccgata
gtggacggggtcaaagtttaa
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