Helobdella robusta: HELRODRAFT_179923
Help
Entry
HELRODRAFT_179923 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_179923
Enzymes [BR:
hro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HELRODRAFT_179923
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HELRODRAFT_179923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
20207491
NCBI-ProteinID:
XP_009026947
JGI:
Helro1_179923
UniProt:
T1FF92
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MFALREIISEFELDEVYFKKIGRSLRDWGLCPNCILRFIFVKNQNIYQIINAAELNKWMD
DLVDNDNKGLTIDNFDKPVERGTEVCCRACLGILQKSFCFSNSNFISKVVDMVNKQNFEF
IDFYCALSLPVSLLIREHSVYVALNELYPEVYQADASNNINNSSSCNRNNYVNDRYSIAA
VREVWKWLNGPELSRQLDRPFNQKSPFEIQIHFEYKNDNRECSFLKDLSPKDFQKRKNSG
SAFNRNNITKILKDTKCKDFKKFCKVPMSIPLIGCHCEVVVCSNQSVFVAGSRTLSQTPW
FVDGIKKFENSVEEIICKPIAEQLFGSRDYKFSSSGREDVDVRMLGRGRPFLIEVINPRK
ISVSDEEFQKIEMFINGGSRDVFIRDVQMVNKEETHHLKEGEQEKLKIYKALCIMKGSIC
DDQLININKLKDIELQQKTPIRVLHRRPLATRTRTVHELKIDLINIHRFEELDDSDVFKV
NTSVEDLKPVLNSDVISLFVLHLTTQAGTYVKEFVHGDFSRTMPNLSTLLGCECDILQLD
VADVLLNWPPSLSR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctttaagagaaattatttcggagtttgaattagacgaagtttattttaaaaaa
attggtaggagtttgagagattggggattatgccccaactgcattttgaggttcatattt
gtgaaaaatcagaatatttatcaaattattaatgctgccgaacttaacaaatggatggat
gatttggtagacaatgataataaaggtttgaccattgataattttgataagccggttgag
agagggacagaagtttgttgtcgagcctgtttgggcatccttcagaaatcattttgtttt
tctaattcaaattttatatccaaagtcgttgacatggttaataaacagaactttgaattt
attgacttttattgtgctttatcattgccagtcagtttgttgatcagagagcatagtgtg
tatgttgcattaaatgaattgtatcctgaggtctatcaggcagatgcttcaaataacatt
aacaacagcagtagctgcaacagaaacaactatgttaatgacaggtacagcattgcagct
gtcagagaagtgtggaaatggctgaatggtcctgaattatctcgacaactcgaccgacca
tttaaccagaaaagtccttttgaaattcagattcattttgaatataaaaatgataacaga
gaatgttcatttctcaaagatctgtcacccaaagattttcaaaaaagaaaaaattctggt
tcagcttttaacagaaacaacataacaaagatattgaaagacacaaagtgtaaagatttt
aaaaaattttgtaaagtgcccatgagtattccattgattggttgtcattgtgaggtggtt
gtgtgctccaatcaatccgtgtttgttgctggcagtcgaacactcagtcaaactccgtgg
tttgttgatggcatcaaaaagtttgaaaactctgttgaggaaatcatctgtaagccaata
gctgaacaattatttggatcaagagattataaattttcatcatctggtcgtgaagatgtc
gatgtcagaatgttaggcagaggcaggccatttctaatcgaagttatcaatccaagaaag
atcagtgtttctgatgaagaatttcagaagatagaaatgtttatcaatggggggtccaga
gatgtttttatcagggatgtacaaatggtaaacaaagaggagactcaccatttgaaagaa
ggcgagcaggaaaaattgaaaatatacaaagctctgtgcataatgaaaggtagtatctgt
gacgaccaactcatcaatataaacaagttgaaggacattgaactgcagcaaaagacgcca
ataagagtcctacacaggcgaccactggcaaccaggaccagaacagtgcatgagttaaaa
atagatctcattaatattcataggtttgaagagttagatgactcagatgtttttaaagta
aatacttctgtagaggatttgaagccagttttaaattctgatgttataagtttatttgtt
ttgcatttaacaactcaagcaggaacatacgttaaagaatttgtgcatggggattttagt
cgcaccatgcctaatttaagtacgttgttagggtgcgaatgcgatatactgcagttagat
gtggcagatgtcttgttgaattggccaccttctttaagtagataa
DBGET
integrated database retrieval system
