Helobdella robusta: HELRODRAFT_184964
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Entry
HELRODRAFT_184964 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
hro
Helobdella robusta
Pathway
hro03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELRODRAFT_184964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_184964
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
HELRODRAFT_184964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
20209926
NCBI-ProteinID:
XP_009019429
JGI:
Helro1_184964
UniProt:
T1FM77
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MANHPPQSQGQCFSVCLAEADANKKFAVLKFPPSNKVDFTLCTAGAKLERENNLKEFKSA
YDIDVLPKFGAGSEYGKEQREEARKKMYGIKIKKYDPQDQPWLLKLGSGKQIKRFRGTRN
GGVTKNASYYIFMPMSDSKFIAQPVEEWYDFIPQAKYKALNAEEAEEEFSRRDRTLNHFA
IMMKKRIDKHENDGNIEEGAGGKKSKKKDKSFLVSEFDEMSNEDDDLDSECEVDKDENAN
EGKPKKRGNKMKRSNLVKKRKGTDDEAEEESDEMDEGQEVDYMSGSSSDDEGMYDDGKRD
EGDTYKDASVVEEEALRKLVNSDDDEDDEENKKDDDNEDDDIMENDKTKDGKAGRESDAE
SSSSSSDIDEENDQLHISGKSASAVKQTESDVSTVDLTNKKRKMDPLATSLLAKKVKLDS
SLSQRTTQSFSSNSDASMEETLKRYLLRKPITPRDLLQKLHSKHNKINRLSKNQLEACLA
DILKKLNPEVNKIDGKMYLSLKPALTVSNNTEI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccatcccccacagtcacagggccaatgtttttctgtctgcttggcagaggct
gatgcgaacaaaaagtttgcagtgttgaagttcccacccagtaacaaggtcgacttcact
ctttgtacagcaggggcaaagttagagagagaaaataacttaaaggagttcaaatcggcc
tatgatatcgacgtcctcccaaaatttggtgctggcagtgagtatggcaaagagcagaga
gaggaagcaagaaaaaagatgtatggaattaaaattaaaaagtacgatccccaagaccaa
ccctggttacttaaattaggctcaggcaaacaaataaaaaggttccgggggacgcgtaat
ggtggagtaacgaagaatgcttcctattatattttcatgcccatgtcagactccaagttt
attgctcagcccgttgaagaatggtacgattttattcctcaagccaaatataaggcacta
aatgcagaagaggccgaggaggagttcagcagacgcgatagaaccctgaatcattttgca
attatgatgaagaaaagaattgataagcatgaaaatgatgggaacattgaggaaggtgct
ggtggaaagaagagcaagaagaaagataaatcatttcttgttagtgaattcgatgaaatg
agcaacgaagatgatgatctggatagtgaatgtgaagtggataaagatgaaaatgccaat
gaaggaaagccaaaaaaaagaggaaacaagatgaagagaagtaatttggtgaagaaaaga
aaagggacggacgatgaagctgaggaagaaagtgatgagatggatgaaggtcaagaggtc
gactacatgtctggttcttcgagtgatgatgagggaatgtacgatgacggcaagcgagat
gaaggcgacacgtacaaggatgcgagcgtcgtagaggaggaagccctcaggaagctcgtt
aactcagacgacgatgaagatgatgaggagaacaaaaaagatgatgataatgaagatgac
gatatcatggaaaatgataagacgaaggatggaaaagccggaagagaatcagacgctgaa
tcatcgtcatctagctccgacattgacgaggagaatgatcagttacatatttctggaaaa
tcagcatcagctgtcaagcagaccgaatcagatgtctcaacagttgatcttacaaataag
aaacgaaaaatggatcctctcgccacaagtttgctagccaagaaagtcaagctggattca
tctttgtctcaacgaacgacgcaatcattttcctcaaacagtgatgcttcgatggaggaa
acattgaaaaggtatctactgcggaaaccgatcacgccacgtgaccttctacagaagctg
cattctaaacataacaaaataaatagactctctaaaaatcaactcgaagcctgtttggca
gatatactaaagaaattgaatcccgaagtgaacaaaattgatggaaaaatgtatctttct
ctcaaacctgctttaactgtttcaaacaacactgaaatttga
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