Helobdella robusta: HELRODRAFT_185604
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Entry
HELRODRAFT_185604 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hro
Helobdella robusta
Pathway
hro03082
ATP-dependent chromatin remodeling
hro03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HELRODRAFT_185604
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HELRODRAFT_185604
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hro01009
]
HELRODRAFT_185604
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_185604
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_185604
Protein phosphatases and associated proteins [BR:
hro01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
HELRODRAFT_185604
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
HELRODRAFT_185604
SWI/SNF complex
HELRODRAFT_185604
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
HELRODRAFT_185604
PBAF complex
HELRODRAFT_185604
SWI/SNF complex
HELRODRAFT_185604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF5767
Motif
Other DBs
NCBI-GeneID:
20210210
NCBI-ProteinID:
XP_009017943
JGI:
Helro1_185604
UniProt:
T1FN11
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MAASVQGLRTFGEKPKPFQIEEDGEVFYVGSEVGNYLRMFRGSLYKRYPSLWRRQMNVEE
RKKLCQLLGFGQHSLASNITLLKASEVDEIFEGKDDKYKALSVSSDINLPRDVKCKKGSG
WVGNMPSNSHHLDAIPCSTMISKNKNAAAKLKTYPLCYDDLDPSIIHENSTQPEVLVPIR
LDIEFEGQKLRDCFTWNKNEQLITPEQFAEVLCDDLDLNPIHFIPAIAQSIRQQIDCYPV
DNILEDQSDQRVIIKLNIHVGNISLADQFEWDLSEKENVPEEFAAKLCAELGLGGEFVTA
ISYSIRGQLSWHQRTYAFSEAPLPVVEVALRNPSEADQWCPFLETLTDAEMEKKIRDQDR
NTRRMRRLTQAAPTW
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagcgttcaaggattgagaacatttggtgagaaaccgaaaccattccaaata
gaggaagatggcgaagtgttctatgttggttcagaggtgggaaattacctacgaatgttt
cgaggctcattgtacaaaaggtatccatcgttgtggaggaggcagatgaatgttgaggag
aggaagaagttgtgtcaattacttggatttggccagcactctttggcatcgaacatcacg
ttgctgaaggcatcagaggttgatgagatttttgaagggaaggatgataagtacaaggct
ctttctgtctcgtcagacatcaatcttccgagagatgtgaaatgtaagaagggcagtgga
tgggttggcaacatgccaagcaactctcaccacctggatgccattccgtgctcaacaatg
ataagcaagaacaagaatgctgctgctaaactgaaaacctacccactctgttacgatgat
ctcgatccatccatcattcacgagaactccacacaacctgaggttcttgttcccataagg
ttggatatcgagtttgaaggtcagaagcttagggattgtttcacgtggaacaagaatgag
cagctgataacgccggaacagtttgcagaagtcttgtgtgacgatttggatttgaacccc
attcacttcataccagccatcgcccaatcaatcagacaacaaattgattgctatccagtg
gacaacattttagaggaccagagtgatcaacgagttatcattaaactgaacatccatgtg
ggcaacatctccttggcagaccagtttgaatgggacttatccgagaaagagaatgttcca
gaagaatttgctgccaagttgtgtgctgagttgggattgggaggagagtttgtgacagcc
atatcgtacagcattcgaggtcagttgagttggcaccagaggacttacgcattcagtgaa
gccccactacctgtggtggaagtggccctgaggaacccgtcagaagctgatcagtggtgt
cccttccttgagacgctgactgatgctgagatggagaagaagatcagagaccaggataga
aatacaaggaggatgagaaggttgacccaggcagctcctacctggtga
DBGET
integrated database retrieval system
