KEGG   Helobdella robusta: HELRODRAFT_185760
Entry
HELRODRAFT_185760 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_185760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_185760
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    HELRODRAFT_185760
 Complex C
   U5 SnRNP specific factors
    HELRODRAFT_185760
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR19_1st eIF2A Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_HPS5 WD_LRWD1 RMC1_N PEP5_VPS11_N Cytochrom_D1 Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 MIOS_WD40
Other DBs
NCBI-GeneID: 20210289
NCBI-ProteinID: XP_009021255
JGI: Helro1_185760
UniProt: T1FN91
LinkDB
Position
Unknown
AA seq 349 aa
MDLKRKAMEGALAIVPAKKTRTDVVGFGTQVNNAIELLGGIRRTSKLQAPIMLLTGHESE
IYCCKFSPNGKFLASAGTDRMILLWNVYGACDNIATLKGHSNAIMDLHFTTDGCQMVTCS
VDKTLSLWDAECATRIRKYKGHQTFVNACDVSRRGPQYLCSGSDDGTVRIWDSRRKTSIQ
TLQSTFQVTSVCFSDTSEQVISGGIDNDLKVWDLRKNDVVYAMKGHMDTVTGLRLSPDGS
YLLSTAMDNTVRIWDVRPYAPQERCVKIFQGNQHTFEKNLLRVSWSPDGTKIAAGSGDRM
VYIWDTTTRRILYKFPGHGGSVNEVDFHPFEPIICSGSSDKQIYLGEIE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggatctgaaaagaaaagctatggaaggtgctttggccattgttccggcaaagaagact
agaactgatgttgttggctttggtacacaagttaacaacgccatcgaactcttgggggga
atcaggcggacctcaaaactccaggccccaatcatgctactaacaggacacgagagtgaa
atttactgctgcaaattttctcccaatggaaagttcttggcttcagctggcacagatagg
atgatattgttatggaatgtgtatggagcctgcgacaacatagccacgctgaaaggacac
agcaatgccattatggatttgcattttactacagacggatgccagatggttacgtgttca
gtggacaagactttatccttatgggatgcagagtgtgccacgagaatcaggaagtataag
ggacaccagacgttcgtgaatgcctgcgatgtgtcgaggagaggcccacagtatttgtgc
agtggtagtgatgatggcaccgttaggatctgggactcgaggcgcaagacgtcgatccaa
accctccagagcaccttccaagttacgtcggtctgcttctcggacacctccgagcaagtc
atcagtggcggtattgataatgatctcaaggtttgggatttacgaaagaatgatgtggtt
tacgcgatgaagggtcacatggatacagttacggggctaaggctgagccctgatgggtcc
tatttgctctccactgctatggataatacggttaggatatgggacgttaggccgtacgct
ccccaggaaagatgtgttaaaatcttccaaggaaaccagcatacatttgaaaagaactta
cttcgcgtctcttggagcccagacggcaccaagatagcagctggatcaggggataggatg
gtctacatctgggatacgacgacgagaaggatactatacaagttccctggacatggagga
tcagttaatgaagtagatttccatccatttgagcccataatttgctctggatcgagtgac
aagcagatttacctgggtgaaattgagtaa

DBGET integrated database retrieval system