Helobdella robusta: HELRODRAFT_185871
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Entry
HELRODRAFT_185871 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_185871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_185871
Spliceosome [BR:
hro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
HELRODRAFT_185871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
20210333
NCBI-ProteinID:
XP_009023766
JGI:
Helro1_185871
UniProt:
T1FND6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MESIGDDKNGQRKRKLTTDSDNEIVEPKKQVVVEEDLRSRSCPYLDTINRSVLDFDFEKL
CSISLSHINVYACLVCGRYFQGRGLKSHAYTHSVQEGHHVFLNLETKKFYCLPDNYQIID
QSLEDIVYVLNPTFTPDHIVQLESSSKLSRAYDGSTYLPGIVGLNNIKANDYCNAVLQAL
SHVTPLRNFFLREENYINIKRVPGDQMGLLVQRFGELMRKLWNTRNFKAHVSPHEMLQAV
VLCSKKKFQITKQGDALEFLSWFLNTLDNSLKGPNGPKKTCIGEAFKGRMRVYSRKLPPI
EMKQEEKMKLLMRPEYQEKEEDISFLYLTCDLPPPPLYPDEMRENIIPQVPLMSVLMKFN
GVNSKEVKTYKDSTLKRYEITKLPRYLILFFKRFNRTTFILEKNPTIVNFPIKGVDFSEL
LTPEIRAKCKSTIYDLVANVVHDGEATSGKGSYRVHILHKGNDKWYELQDLHVVDILPQM
ITLTESYIQIYELRKPEKTDNHNKSN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaatcggcgacgataaaaatggacagcgaaaaagaaaattgacaaccgattcg
gataatgaaattgttgaaccaaagaagcaagttgtggtcgaagaagatttgagaagcaga
agctgtccatacctagatactataaataggtcggtcctagatttcgactttgagaagcta
tgttccatctcgttgtcacatattaacgtctatgcctgcttggtatgtggacgctacttt
caaggtcgaggtttgaagtctcacgcgtacacgcacagtgtccaggagggccaccatgtt
tttctaaatttagaaacaaagaaattttactgcctgccagacaattatcaaattattgat
cagtctctggaggacattgtgtatgttctcaatccgaccttcaccccagaccatattgtc
caattggaatcatcttcaaaactttcgagggcatatgatgggtcgacatacttacctgga
attgtcggtctgaacaacataaaggccaatgactactgcaatgcagtactccaggctctt
tcccacgtgactccattgaggaatttcttcctccgagaagagaactacataaacataaaa
agggtgccaggtgatcagatgggccttctggtccagaggtttggtgagcttatgaggaaa
ttatggaatactaggaattttaaagcccacgttagccctcatgagatgttgcaagctgtg
gttttgtgctccaagaagaaatttcaaatcaccaaacaaggtgatgctttagagttccta
tcatggttcttaaatacactggataattctctaaaaggtccaaatggcccaaaaaaaaca
tgcataggtgaggcattcaaaggtcggatgagggtgtactccaggaagctgcccccgatc
gagatgaaacaggaggagaagatgaagttgctaatgaggcccgagtatcaggagaaagaa
gaagacatttcattcctatatttgacctgtgaccttccacccccgccgctctaccccgat
gaaatgagggaaaacatcataccccaggtcccactgatgagcgtgctgatgaagtttaat
ggggtaaattcgaaggaggtgaagacctacaaagactcgaccttgaaacgatacgaaatc
accaaactgccccgctacctaatactctttttcaagagattcaatagaacaacgtttatt
ctggaaaagaaccccaccatcgtcaacttccccatcaaaggcgtggacttctccgagtta
ctaactccagaaatccgggccaaatgcaaaagcaccatctacgatctggtggccaacgtg
gttcacgacggtgaagccacctctgggaagggaagctacagggtccatatccttcataag
ggaaatgacaaatggtacgagttgcaggatttgcatgtggttgatatactgcctcaaatg
attactctcactgaatcctatattcaaatttatgaattgagaaagccagagaaaacggat
aaccataacaaaagcaactga
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