Helobdella robusta: HELRODRAFT_187002
Help
Entry
HELRODRAFT_187002 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_187002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_187002
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELRODRAFT_187002
Spliceosome [BR:
hro03041
]
Complex A
U2 snRNP components
U2 related factors
HELRODRAFT_187002
Complex B
HELRODRAFT_187002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Cas3-like_C_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
20210600
NCBI-ProteinID:
XP_009017238
JGI:
Helro1_187002
UniProt:
T1FP53
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSGRDMIGIAKTGSGKTLAFLLPMFRHIADQPELESDDGPIAIIMTPTRELAMQIGKECR
KFSKSLNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGKVTNLRRCTYI
VLDEADRMFDMGFEPQVMKIVDNVRPDRLTVMFSATFPRQMEALARRVLTKPIEVTVGGR
SVVCADVEQFIIVLEDTQKFLKLLEILGLYQERGSCLVFVHKQEHADELMKNLLKHGYPC
MSLHGGIDQYDRDSTMEDFKAGNIKLLIATSVCSRGLDVKDLVLVVNYDCPNHYEDYVHR
CGRTGRAGNHGYAYTFVSHDQGRHAGDLIKALELSKTPVPEELKVLWQKFKDEMEADGKK
ISSYSGFHGKGFKFDETEAELANDRKKLQKAALGLQDSDDEDAGLDIEQKIERMFASRKR
VCDVNQSLTSLPSASNINNVQSQSNLEKLELAKKAASQINILKNTTAEPLDVNQQAAAAI
LKGGVAVTHVSSKTIAEQMAEKINAKLGYRPMTEEEKEAELGILPANQVAEPTKRYEEEL
EINDFPQTARWKVTSREALSQISEFSDAGITVRGIYIPPNKDPKEGERKLYLGIEATSEI
AVQKAKAEITRLIKEELVRLQNSYQPISKNRYKVL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgggatatgatcgggatcgccaaaaccggaagtggaaagaccctcgccttc
ctgctgcctatgttcaggcatatcgccgaccagccagagttggaatcagatgacggaccc
attgcgatcatcatgactccaacgagagagctggccatgcagatcggcaaggagtgcagg
aagttcagtaagtcgttgaatctccgctgtgtctgcgtctacgggggcaccggcatttca
gaacaaattgccgagttgaaaagaggggcggagattatcgtttgcactcctggcagaatg
attgacatgctggcggccaatagtggcaaagtgacgaacttacggaggtgcacgtacatt
gtactggacgaggcagacaggatgtttgacatgggctttgaacctcaagtgatgaagata
gtggacaacgtacgtccagacagactgaccgtcatgttcagcgcgaccttcccgcggcag
atggaagccctggcccgcagggtcctcacgaagcccatcgaagtcaccgtcggaggtcgg
agtgtcgtctgcgccgatgttgaacagttcatcatagttctggaagacacgcaaaaattt
ctgaaactcctcgagatccttggtctctaccaggagagaggctcgtgcctggtgttcgtc
cacaagcaggagcatgcagacgaactgatgaagaacttgctgaagcacggctacccgtgc
atgtcgttgcatggaggcatcgatcaatacgatagggacagcaccatggaagattttaaa
gctggaaatatcaaactgctgatcgccacttcggtttgtagcagaggtctcgatgtaaag
gacctcgttctggttgtcaactatgactgtcctaatcattacgaagattacgtgcatcgg
tgtggacgcactgggcgggcggggaaccacgggtacgcctacacgttcgtctcacatgac
cagggcagacacgccggtgacctcatcaaggccctcgaactttcgaaaacccccgtcccc
gaagagttgaaggtcttgtggcaaaagttcaaggacgaaatggaagctgatggaaagaag
atatcaagttacagtggcttccacggcaagggcttcaaattcgacgagacagaagccgaa
cttgcgaacgacaggaagaagctgcagaaggccgctctaggactgcaggacagcgatgat
gaagacgctggattggatatcgagcagaagatagagcgaatgtttgcaagccgaaagagg
gtttgtgacgtcaaccaatcactgacctccttgccatcggccagcaacatcaacaacgtt
caatctcaatccaacctcgagaaattggaacttgctaagaaggctgccagtcagattaac
atactcaagaatacaaccgctgaacccttggacgtcaaccagcaggcggcagctgccatt
ctgaagggaggcgtggccgtcacccatgtctcgtcaaaaactatcgccgaacaaatggcg
gagaagataaacgccaaattaggttaccgaccgatgacggaagaggagaaggaggcggag
ttaggaatcctaccagccaatcaggttgcagaaccaacgaagaggtatgaagaggagctt
gagatcaatgatttcccccagacggccagatggaaagtgacatctagggaggccctgtct
caaattagtgagttctcagacgctggtatcaccgtcagaggtatctacatacccccaaat
aaagatcctaaagaaggtgagaggaaattgtatttgggtatcgaagctacgagtgagata
gccgtgcagaaagcaaaggcggaaataaccaggctcatcaaagaggagcttgtacgattg
caaaactcttaccagccaatcagcaaaaaccgatacaaagttttataa
DBGET
integrated database retrieval system
