Helobdella robusta: HELRODRAFT_187057
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Entry
HELRODRAFT_187057 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_187057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_187057
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_187057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF3634
PSMA-like_N
Motif
Other DBs
NCBI-GeneID:
20210611
NCBI-ProteinID:
XP_009018191
JGI:
Helro1_187057
UniProt:
T1FP64
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MTASGFGFGASSATSATGLFGGFGLTSTTTTAQSTGFGLQAAAAVTNTTGVAPFFGKGFF
SNSASSTPTTTTQSSIFGGNGFKTGLGGGAAGFGGGLTGLGGTAVGLGGTATGFGGTGTG
FGGTNTGFGGTTTGFGGTGTGFGGGTTGFGGTATGFGASTGLGGSTTALGGNLFSSTTST
LNQSSQQQQQQQQQQQQLSLALKLAVCNPTIFGDERDLVVAKFNQLQACWGAGKGYYNQQ
GDFVVFTPDNVYSLFKAVGYSCIPTNKNEDGLVYLVFGRGQQEVLANQMQVVDALHKLLG
AKANHIVCVESITPLADDKCEMVIYVQDRQITGITTRVLTSDLFAFLNQQSSKQHLSSQL
SVSDVYVKVAMSHDQLKFYLENPPAGIDPHIWEQAKLDNPNLEKLLPVPIVGFSELHLRL
KHQDQQSQLHQLRLDVIGSDISSLKSKMVNMVAKVDEYKRRQVQLNHRVLKVIVQQEINR
KLGYPIQPEEELLSAQLQSISAELNAPTQFKARLRELASHIELQNMKQATHGGDVKFNIS
EEVRADIKQHLRNQQNGISHLIQIIKDDLNEVKTMEKWLTEKQLNNTRRS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttcaggatttggctttggagcttcgtctgcaacatctgctactgggcttttt
ggtgggtttgggctaacttctacgaccactactgctcaatcaactggttttggtctccaa
gcagctgcagcagttacaaatacaacaggggtagctccattttttggtaagggcttcttt
tcaaactctgcctcctcaacaccaacaactaccacacaaagttctatttttggaggtaac
ggatttaagactgggctaggagggggtgctgcaggatttggagggggtcttacagggttg
ggaggaactgccgtgggattgggagggactgccacgggattcggagggactggcacagga
ttcggagggactaacaccggttttggggggactaccacaggttttggagggactggcact
ggatttggagggggtaccacaggtttcggagggactgccacaggatttggggctagcaca
gggttgggagggagtactacagcgctgggtggaaatttgttttctagtaccactagtaca
ttgaaccagtcatctcaacaacagcagcaacagcagcagcaacaacagcagctgagtttg
gcactgaagttggcagtttgcaatccgacaattttcggagacgagcgtgacttggtggtt
gcgaagttcaaccaactgcaagcttgctggggggcaggaaagggctattacaaccagcag
ggagattttgttgtgttcactcctgacaatgtttactcactatttaaggccgttggctac
agctgcataccgaccaataagaacgaagacggcctcgtttatctcgtttttgggcgcggc
caacaagaggttttagccaatcagatgcaggttgttgatgccctgcataagttattagga
gcaaaagccaatcacattgtttgcgtagaatcgataacgccattggctgatgataagtgc
gagatggtcatatatgttcaggacaggcagataacgggaattactaccagggtcttgacc
tctgacctctttgccttcctcaatcagcagtccagcaagcagcatctatcttcacagctg
tccgtatccgacgtttacgtcaaggtggccatgtcacatgaccagctgaagttctatctg
gaaaatccccccgctgggatagatccgcacatctgggagcaggcaaaactggacaatccc
aacctggaaaagttacttccggttcctatcgtcggattttcagagctgcacctgaggttg
aagcaccaggatcaacagtcgcagttacatcagctacgattggatgtcatcgggtcagac
atttcctcgttaaaaagcaagatggtgaacatggtggcgaaggtcgatgagtacaaacga
aggcaggtgcagctgaaccacagagtacttaaggtcatagttcaacaggaaataaaccgc
aaactaggctaccccatacagccagaagaagaattattgagtgcccaactgcagagcata
tccgccgaactcaatgccccgacccaatttaaggcgcgcctccgagaactcgcctcacac
atagagctgcagaacatgaagcaggcgacccacggcggcgatgtcaagtttaacattagc
gaagaagtgagggctgatatcaaacagcacctgagaaaccagcagaacggcatcagtcat
ctcatccaaatcatcaaagacgacttgaacgaagtcaaaacgatggagaaatggctgaca
gagaaacaactgaataacaccaggcgatcctga
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