Helobdella robusta: HELRODRAFT_188105
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Entry
HELRODRAFT_188105 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_188105
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_188105
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HELRODRAFT_188105
Membrane trafficking [BR:
hro04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
HELRODRAFT_188105
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
HELRODRAFT_188105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
RNA_pol_3_Rpc31
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Cwf_Cwc_15
DNA_pol_phi
Peroxin-3
DZR
Anti-TRAP
DUF6556
Zn_ribbon_PF0610
GOLD_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
20210778
NCBI-ProteinID:
XP_009009823
JGI:
Helro1_188105
UniProt:
T1FPN1
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MAEAAVEFPSVPNYFCHRCARSVKINPTTVLTCPHCESEFIEELTQELEENDRARNNSRL
TASPMDVATLLSNIFASVTPDEDYPFPRSRNTNNSSNNNRTAADDADDEEDKDDEDEEED
EEEQEEVEEMGERINRRLWVGPYRLPRPVRRRNQESRPPPRFLGNMLLGRYPNFSDLFAL
SSQEFRSNPRDYAWGSDGLDNIITQLLNQMENSGPAPAKKEDIDNLPDVLVSATQIDLFA
QCSVCMDYFIVEERVKELPCHHFYHEDCIVPWLKMHGTCPICRYSISPDESPKKTETSSN
NSTSNNENSMDNTRNSPRPSRARLLRYPQSSSSSSSWSPIFTALRLRPPADHQHFSASPT
YSPPGNNGNNNIISSNNNITSNNNIIRAATIQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgctgtggaattcccttcagtgcccaattatttctgccatcggtgtgca
cgatccgtgaagataaacccaacaactgtccttacatgtcctcattgtgagagtgaattc
atagaagaattgacacaggaattagaagaaaatgatcgagctaggaataattctagattg
acagcttccccgatggatgtagccacattactttccaacatctttgccagtgtcacacca
gatgaagactacccattccctagatcgagaaacactaacaacagcagcaacaacaatcga
actgcagcagatgatgctgatgatgaggaggataaagatgatgaagatgaagaagaggat
gaagaggaacaggaagaagttgaggagatgggagagagaatcaacaggaggttgtgggtg
ggcccatatcgtcttccacgccccgtgaggaggaggaaccaggaatcaagacccccacct
aggtttttaggaaacatgctgcttgggagatatcctaacttttctgacctgtttgcatta
tcaagccaggaatttagatcaaatccgagagattatgcctggggatctgatggcttggat
aacatcatcacacaattgttgaaccagatggagaacagcgggccagccccggccaaaaaa
gaggacatagataatcttcccgatgttctagtgtctgccacacaaattgatttatttgct
cagtgtagtgtttgcatggactacttcattgtggaggagagagtgaaggagctgccgtgc
caccacttctaccatgaagattgcatcgtaccatggctcaaaatgcacgggacctgcccc
atctgtaggtactccatctctcctgacgagtctcccaagaaaaccgaaaccagcagcaac
aacagcaccagcaacaacgaaaacagcatggacaacactcgcaacagcccgcgaccgtct
agagcaaggttattgcgatacccgcaatcgtcatcatcttcttcatcgtggtcccctatc
tttactgccctgcgacttcgaccgccagcagatcatcagcacttttctgcttcacctaca
tacagcccgccaggtaacaacggcaacaacaacatcatcagtagcaacaacaacatcacc
agcaacaacaacatcatcagagcagcgacaatacagtga
DBGET
integrated database retrieval system
