Helobdella robusta: HELRODRAFT_188261
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Entry
HELRODRAFT_188261 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14296
nuclear pore complex protein Nup153
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
hro03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_188261
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HELRODRAFT_188261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_188261
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_188261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
20210830
NCBI-ProteinID:
XP_009015467
JGI:
Helro1_188261
UniProt:
T1FPT3
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MTQSGLCKKYSVHGTPVFPSKKGPPAKNKPLPVILATRSNTKFGTDQCISSKSGGKMRHE
REKHHQAASRPLNNDSVDSYTAKLSDDALVGIKLPPVKMQPLITSTTSNVDKKSTFDQQS
RRFVFSPPDIILDDKNGDNLKHKKFDFSEPTNLVGSTTSYTPPSLPSTSHLGHSQEDKPP
LAISSSSLQHSLPGPSTFTQADFFKQPLSQSSNFCNLSTSTHITRQTPPKINMKAFVEDE
LKSSGDQMEKEKPIESSSNMSSSTSSSSASSLFTSSVSSSSFTSSSTSSSSSCAPSFSSP
ISKNVTTDSIPLSVMFKPPTDQWKCPMCFVLNSNSLAACSCCATAKPQSTLLANSPALCT
APTLVPPVVSPSSLAPLKPIPLNELFKPLSSDKWSCPTCMVSNKLSDLVCLCCGEQKPPS
SSLTSSSSLTSTTSSSLTSSTSLTSTTSPFLPSTSTTSTPNPALPTTFNTTSNWNGTNIQ
PTKPGDMWICAECYVKNKSSDMTCLACESRKPGMSNNDGSLVSQADAKTQQITINTNGGF
SFKGNLGVDGSAPFNPASFGSNLVNNVKDKEINQVTSSKITGGFKPSFQQTSNLLTSMPS
TTNNIFGGFKFGSTALQSLPLTNTVATTSAAIISSSAPTLVSPPSTTTVSGGSVLSFEAK
NEIQKFGSIATVTTSSTAFPLFVSSGSNLTSLTTTTTAAPSSNVFGNFSINSTKSDAIAI
KSLFAVNCNAMPSSSASSSNFASIVTTAVPNIFKFGNSLSTVPPSFVTSSFSTQPTVTSN
KTSLAFGSNQSSQAQPQFNFGSFANSQQNTFGQLSSSAVASSAPTPVFTFGQQNAASLFN
QPQHTVPPAHLQNTSFVFTSKENTTNFSFNAAANNSVFGGGAAQATFFGTNRKSISDDMM
ADNDSALSSNNNNQQLQQQQQQNSIFGSSNISSANTGFNFGSSLQAPAFAPQPPAIFTFG
QPPLQPAWNEQPTFNFTGSNSIGNISFNAGTALNASASSNVSNRVIKKAARRTTRR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatcaggactgtgcaagaagtacagtgtacatggcactcctgtcttcccatca
aagaaagggcctcctgccaaaaacaagccattgccagtaattcttgctactagatctaat
acaaaatttgggacagatcaatgcatctcttcaaagtctggtggaaagatgaggcatgaa
agagaaaaacatcatcaggctgcaagcaggcctctaaataatgacagtgtggatagttac
accgcaaagctgtctgatgatgcactagttgggatcaaactcccacccgttaagatgcag
ccgttgataacttcaactacttcaaatgtggacaagaagtcgacatttgatcaacaatca
agacgctttgtcttcagccctcctgacatcattttagatgataaaaatggagataatttg
aaacacaagaaatttgatttcagcgagcccactaaccttgttggttcaacaacatcttat
acacctccatcactgccttcaacatctcatcttggtcattctcaagaagataagccacct
cttgcaatctcttcttcatcattgcaacatagtctgccaggccctagcacattcacgcag
gctgattttttcaaacaacccctctctcaatcttctaatttctgcaacctttctacaagt
actcacattacaaggcagacacctccaaaaatcaacatgaaagcgttcgtagaagatgaa
ttgaagagtagtggagatcaaatggaaaaggaaaaaccaattgaatcatcatcgaacatg
tcatcttctacatcttcatcttctgcatcatcattattcacatcatctgtatcatcatca
tcatttacatcatcatctacatcatcttcttcctcgtgtgcaccatctttttcatctcca
atcagcaaaaacgtaacaacggatagtattccattatctgttatgttcaagccaccaact
gaccaatggaaatgcccgatgtgctttgtactgaatagcaacagtttggctgcatgttca
tgctgcgcaaccgctaaacctcagtccactttactagcaaattccccagcactgtgtaca
gcgccaacacttgtgccaccagttgtgtcaccatcttccttagcaccactgaaaccaatc
cctctgaatgagctgttcaaaccattgtcgtctgacaaatggtcatgtcctacttgcatg
gtatccaacaagttgtctgaccttgtgtgtttgtgttgtggagagcagaagccaccatca
tcgtctctcacatcttcatcatctctcacatcaacaacatcgtcgtctctcacgtcatca
acatctctcacatcaacaacatcaccatttctcccatcaacatcaacaacttcaactcct
aatcctgcattgcctaccactttcaatacaacttcaaactggaatgggacaaatatacag
cccacaaaacctggtgacatgtggatttgtgcggaatgttacgtaaaaaacaaaagttcg
gacatgacatgtttggcgtgtgagtccagaaagccaggaatgtcaaacaatgatggttca
cttgtgtcacaagctgatgccaaaacacagcaaataactatcaacacaaatggaggattc
tcattcaaaggaaatcttggtgttgatggttctgcaccattcaaccctgcaagttttgga
agcaatctagtaaataatgtaaaagataaggaaattaatcaagtcacctccagcaaaata
actggtggtttcaaaccatctttccagcagacgagtaatttactaacgtccatgccttca
accaccaacaatatttttgggggttttaaattcggatctacagctctacaatctctcccc
cttacaaacaccgttgcaacaacttcggctgccattatctcctcatcagcaccaacgtta
gtatctccacccagcacaaccacagtctcagggggcagtgttctgtcttttgaagctaaa
aatgaaattcaaaagtttggctccattgcaacggtcactacaagttccacagcgttcccg
ctgtttgtttcttcagggtccaacttgacttcactgacgacaacaacaacagctgcacca
tctagtaatgtctttggcaacttttccatcaattctacaaaatctgacgcaattgctatt
aaatcattgtttgccgtcaattgcaatgcaatgccatcgtcttcagcttcatcttctaat
tttgcatcaatagtaacaactgctgtgcctaatattttcaagtttggtaactcattatca
actgtgccaccatcttttgttacatcttcgttttcaacacaaccgacagtcacttccaac
aaaacttctctagcatttggaagtaatcaatcatcacaagcgcagccccaattcaatttt
ggttcatttgcaaattcacaacagaacacttttggtcaattatcgtcaagtgcagttgct
tcctcagcgcccacaccagtgttcacctttggacagcagaatgctgcatcactcttcaac
caaccacagcacacagttccacccgctcatctccaaaatacttcatttgtattcacatct
aaagaaaacacaacgaatttctcttttaatgctgccgcaaacaacagtgtttttggagga
ggtgcagcacaggcaactttctttggcacaaacaggaaaagcatcagtgatgatatgatg
gcagataatgattctgctctcagcagcaacaacaacaaccaacaactacaacaacaacag
cagcagaactcaatttttggatcttccaacattagttctgctaacacgggcttcaacttt
ggatcatcattgcaagcaccagcgtttgctccacagccgcctgccatcttcacatttgga
cagcccccactacagccagcctggaatgagcaaccaaccttcaactttactggatcaaat
agcattggcaacatatcattcaatgcggggacagcattgaatgcatcagcaagctccaac
gtatccaacagggtcatcaaaaaggctgccaggagaacgaccaggagatag
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