Helobdella robusta: HELRODRAFT_188913
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Entry
HELRODRAFT_188913 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_188913
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HELRODRAFT_188913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
DUF4037
Met_synt_B12
TPR_12
Motif
Other DBs
NCBI-GeneID:
20211068
NCBI-ProteinID:
XP_009022765
JGI:
Helro1_188913
UniProt:
T1FQH1
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MKNLKIINQLKFVGISCLNGCKFISIDPDTNRIFGANDFAVFLFQFHPEKQPSYEVLSTV
SLKESGFLEADEHIVAIQYIVDQFALCIALSNGQIVYWNSPIDSNQLECVGCCEGELKYM
KWSPDSELMVLVAGVDTVILMNRDFLPITKQHYQSSDFGEANFVSVGWGKKETQFHGSEG
KQAAVKKQEELALLAWDDRRPCVTWRGDGLFFAVSFVSDATGVRSFKVWSREGVLHSTGT
PTSGLYSCIAFMTQGNFLAGAVLHKQQHKIVFFEKIGLQHGEFCIPHLNECCKILEVAWN
LDSTALSVLSTVVDTKDQEHSKYQVQIWTMCNYHWYLKCNLEYDERQKVISVIWDQEVPL
RFYVVCSSGLWHTCTYASVVQQSSDDQTVVAVLDGSKILMTPFTHVVIPPPMSAYHLFLP
YFAHGIAWSCAGSYKDIIVLSSNAILYWFTHSPEMPTMEIPGVGVVLDVGSGGLARANCP
LPRLVAWARFASYSNSTSPSISHMTWINKSTLIACVCAADVDGGDEDALCFIVTHHINWE
DREITVKLKTKISGGQSVISIDYNEVADRLFVQLNDGTCLSYDHTCGLLTEWNNHRNVPF
SFPRPCSQASIVTYLDKCFLIGLTEQFRFFIDSFEVANNCTSYAVHNHFILFTTHAHTLQ
CIPISKLEDLDPSSLVSMESSSASSRNVERGSKLVCVVGKETKVVLQMPRGNLEVIHPRW
LLIDELKKLLDCQQYRGAFEICKKHRINMNIFIDHNKSMFLEHIETFVQQLSTSSNINLF
LSDLSNENFTKTMYAGYYATPGLEGTSSSSSVPPRSSSSSSSTKVDEICDSLYKVMINKD
CDTFFLSILMTNLKRCPPNVEGALSDIKQLKEGLDALKKGTSPSTTSATATPTTATSTTD
TTTSISTTAPQTIHVTPTMKTTTTEALKFIIRLVDVNELFNIALGTYDLQLVVMVAEMSH
KDPKEFLPYLNELKEMPENLRKYTINMKLKRYSQALKYISACGDDHFVYCMKLVKEQSLY
SEAFNHFKQDTPQYKEIAGAYGDDLKQKRCYETSGFMYYRAHMYQQALEMFEKIHNWRLA
LDCFYKIHHNSCNISSNIGDDGNSKDVSAGGDAGNFKLELVKFARQMSARLVEAHRHGEA
AVLMENYADDYEETVNIYVAGHMWQDALALINRHSRPDLISANLLPAVLSALQEQKDLMK
KSKEDFSKYFERLQVVRKMKKEKMAMEDFVDDERRVYPSDLYSDTSSVGDAESVTSSTIS
SSTATSRRSKNSGRSLKSKQKKNRKRWSLREGGPTEEFALMEFLHNSITSVQRWKDEVGQ
LARILVLFAMDKPAEELQAELIELVEMMDDSIERIWLSGGADQESPRSNMMYGAESSSNS
ISRSFNTADASSRKDANLSATIPFWFALLSLIRMPGGDYCLCPDVNFQSTIFCFNLHMF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaaaaataataaatcagttgaaatttgttggaatatcttgcttgaatggt
tgcaagttcattagcatagatcctgatactaatcgtatttttggagccaatgattttgca
gtttttctgtttcaatttcatccagaaaagcaaccgtcatacgaagttctctcaactgtt
tcattaaaagaaagtggcttcctcgaagctgatgagcacatagtagcaatacaatacatt
gtcgaccagtttgcactctgcattgcactatccaatggtcaaattgtttattggaattct
cccatcgactctaatcagttggaatgtgttggatgttgtgaaggtgagctgaaatacatg
aagtggagtcctgattctgaattgatggtcttggttgcaggcgttgatacagttatttta
atgaacagggatttcctgccaatcaccaaacaacattatcaaagttctgattttggagaa
gcaaacttcgtgtcggtgggttggggaaagaaggaaactcaatttcatggctctgaaggc
aagcaggctgctgtcaagaagcaagaggagttagctttgctggcatgggatgatagaagg
ccatgcgtaacatggcgaggagacggattgttctttgcagtgtcatttgtttcagatgca
actggcgtgagaagtttcaaggtctggtcgagggaaggtgttctgcactcaactggcact
cccaccagtggactttacagttgcattgctttcatgactcaaggcaactttctggcaggg
gcagtgctgcacaagcaacaacacaagatcgtgttctttgagaagatcggacttcagcat
ggagagttttgcatacctcacctcaatgaatgctgcaagatcctggaggtagcatggaac
cttgatagcacggcactctccgtattgagcactgtcgttgatacaaaagaccaggaacat
tcaaagtatcaagttcaaatatggacgatgtgcaactaccactggtacctcaaatgtaat
ttggagtacgatgaacgacagaaagtaatctcagtgatatgggaccaggaggtacccctg
aggttctatgttgtgtgttcttcgggattgtggcacacttgcacgtatgccagcgttgtg
cagcagagttcggacgatcaaactgtggtggccgtccttgatgggtcgaaaattcttatg
actccattcacacacgtcgtcattccacctccgatgtctgcataccatttgtttcttccc
tactttgcgcacggaatagcgtggagctgtgcaggttcttataaggacatcatagtgctg
tcgtccaatgctattctgtactggttcactcattcacctgagatgccaactatggagatc
cctggtgtaggtgttgtgttggacgttggatctggaggcctagctcgggccaactgtccc
ctaccccgacttgttgcgtgggccaggtttgcatcgtacagtaactcaacctctccgtcg
atcagtcacatgacgtggatcaacaaaagcacgttgatagcgtgcgtctgtgcagctgat
gtggacggtggcgatgaggacgccctctgttttattgtcacacatcacataaattgggaa
gatagagaaataactgtaaaattgaagaccaagatttctggtggccaatcggtgatctcc
attgattacaatgaagtggctgataggttgttcgttcagctgaatgatgggacatgtctt
tcatatgatcacacgtgtggacttctaacagagtggaacaaccacagaaacgtaccattt
tcctttccgagaccgtgttctcaggcctcaatagttacctatctagataagtgcttcctc
attggactcacggagcaattcagattcttcatcgacagtttcgaggtggctaacaactgc
acgtcttatgctgtccataatcattttatactcttcacaacgcatgcacacactctgcaa
tgcattcctatctcaaaattagaagatctagatccttcttctctcgtcagcatggaatca
tcgagtgcatcaagccgcaacgtcgagagaggttccaaactggtctgtgttgttgggaag
gagacgaaggtcgtcctgcagatgccacgtggcaatctggaagtcatccatccgaggtgg
ctgctcattgacgagttgaaaaagttacttgactgccagcagtacaggggggcgtttgaa
atctgcaagaaacatcgcattaatatgaacattttcattgaccacaacaaatccatgttc
ctagagcacatcgaaacattcgtgcaacaactttcaacctcatccaacatcaatttgttt
ctcagcgatctgtcaaatgaaaatttcacaaaaaccatgtacgctggttactatgctaca
cctggacttgaaggaacatcatcttcatcatcagttccaccacgttcatcttcatcgtcg
tcttcaaccaaggtggatgaaatttgtgatagcttgtacaaggtcatgatcaacaaggac
tgtgatacgttctttctctcaattttgatgacgaatttgaaacgctgcccaccaaatgtg
gaaggggcactttccgatatcaaacagttgaaagagggtcttgatgcgttgaaaaaggga
acatcaccttctacaacatcagcaacggcaacaccaacaacagcaacatcaacaacagat
acaacaacatcaatatcaacaacagctccacagacaatacatgtaacgcccactatgaaa
acaacaaccacagaagcgttgaaattcattattcgtttagttgatgtcaacgagttgttc
aacattgccttaggtacatacgaccttcagcttgttgtcatggttgcagagatgtcgcac
aaggatccaaaggagttcctgccatatttgaacgagttaaaggagatgccggaaaacctt
cggaagtacacaatcaacatgaaactcaagagatattcccaggctctcaaatacatctcg
gcttgtggtgatgatcatttcgtttattgcatgaagttagttaaggagcaaagcctctac
agtgaggcattcaatcacttcaaacaagacacacctcagtacaaggagatagcaggggca
tatggagatgatctaaagcagaagagatgttacgagacatcaggcttcatgtactacaga
gcccatatgtaccagcaggccctggagatgtttgagaagatccacaactggagacttgct
ctcgactgcttctacaagatacatcacaacagctgcaacatcagtagcaacataggtgac
gatggtaacagcaaggatgtttccgctggcggagatgctggaaactttaaattggaatta
gtgaagtttgcaagacagatgtcagctcgtctggttgaggctcatcggcatggagaagca
gccgtgcttatggaaaattatgctgatgattacgaagagacggtgaatatttatgtggcg
ggccacatgtggcaggatgcattggctctgataaacagacacagtcgacccgacctgatt
agcgccaacttgctgcctgccgtcttgagtgcactgcaggaacagaaagatttaatgaag
aaatcgaaggaggacttctcaaaatatttcgagagactgcaagttgtgaggaagatgaag
aaggagaagatggcgatggaagacttcgtcgacgatgaacgaagagtgtacccatcggat
ttgtactcggacacgtcgagcgtcggtgatgccgagagtgtgacgtcatcaaccatttcg
tcatcaacagctaccagtaggagatctaaaaatagcggtcgcagtttgaagagcaagcag
aagaaaaatagaaagaggtggagtttgagggagggaggaccaactgaagaatttgccttg
atggagtttctccacaattcaatcacctccgtgcagaggtggaaagatgaggttggtcaa
cttgcacggatattggtgttgttcgcgatggataaacctgcggaggagttgcaggcagag
ttgattgagttggttgaaatgatggatgattcaatcgaacgcatctggttatctggcggt
gctgatcaggagagtcctcggtccaacatgatgtatggcgcggaaagttcatcgaattcg
atttccagatcattcaacacggccgacgccagcagcagaaaagatgcaaacttgtcagcc
accattccattttggttcgccctcctttctttgataaggatgccaggtggagactattgt
ttgtgtcctgatgtcaactttcagtctactatattctgttttaatttgcatatgttttaa
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