Helobdella robusta: HELRODRAFT_189163
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Entry
HELRODRAFT_189163 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hro03029
]
HELRODRAFT_189163
Mitochondrial biogenesis [BR:
hro03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HELRODRAFT_189163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rubredoxin_C
Ribosomal_L22e
Motif
Other DBs
NCBI-GeneID:
20211153
NCBI-ProteinID:
XP_009025444
JGI:
Helro1_189163
UniProt:
T1FQQ6
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MVSLKKLICLPTAHHRACYSTLSARCMITITSSATNNASNDGIRRHVHFSPAPQPASSSR
SGENLNDKSYLLECLLRNVLFKNEHCIAIAKPNGFPMQSIKYEENSDKKIDIRAENFFSM
STLKNDLKRYLNVPDLFEVFTQKREFGGIVLFCFQKDVQNLLSRYFKNAKINKLHISEYK
VISVGKMTKQEGVDEMTIEQNQINNNVMSTLVRQPSKNKQKMHGNYTNLAVKFKVTQSSK
VAFNCTLNNVTVWPTTTKWDALEMFFIHKMSAILGDHKYSSRIRNLLDKQVLVKPEQAHP
EPQALPKEVCSLLKVPESDTSNILSHVFCTKLIIPKLFYDGNRTLTYNRMCNRKSLGPDF
GTYAKENIHNTDEQTINCDQQKSLIIIEAALPTFFQETVNYFNLM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattaaaaaaattaatctgtttgcccacagcacatcacagggcttgttattcc
actttgtccgccaggtgtatgattaccattacttccagtgccaccaacaatgccagcaat
gatggaattcgacggcatgttcacttcagccctgcaccacaacccgcaagtagtagtagg
agtggtgaaaacttaaatgacaaaagttacttgttagagtgcttgttaaggaatgtttta
ttcaaaaatgaacattgcattgccatagccaaaccaaatggttttccaatgcaaagcatc
aaatatgaagaaaattcagataaaaagattgatataagagcagaaaatttcttttcgatg
tctacattaaaaaatgatttaaagaggtacttgaatgtaccagatttgtttgaagttttc
acgcaaaagagggagtttggaggaattgtgttgttttgttttcaaaaagatgttcaaaat
ttattatcaagatatttcaaaaatgcaaaaataaacaagctacacatttctgaatacaaa
gtaatatctgtaggcaaaatgacaaaacaggaaggagtggatgagatgaccattgaacaa
aaccagatcaataacaatgtaatgtctaccctggtgaggcagccatcaaagaacaaacag
aaaatgcatggcaactacactaatcttgccgtcaaattcaaagtaacacaatcctccaaa
gttgcattcaactgcacattaaacaatgtgactgtttggcctacaacaaccaaatgggat
gccttggaaatgtttttcattcataagatgtcagccattttgggtgatcacaagtacagt
agccgaataagaaacttgctagacaaacaagttttagtgaaaccagagcaagcacaccct
gagccgcaggctttgccaaaggaggtttgcagcttattgaaggttccagaaagtgataca
tcaaatattttaagccacgttttttgtactaagctcatcataccaaaattgttttatgat
ggaaatagaactttaacatataatagaatgtgcaacagaaaatctcttgggccagatttt
ggaacatacgctaaagagaacatccataatacagatgaacagacaatcaactgtgatcaa
caaaagtcattgataattatagaagcggccttgccgactttttttcaagaaaccgttaat
tattttaatttaatgtag
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