Helobdella robusta: HELRODRAFT_189215
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Entry
HELRODRAFT_189215 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_189215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_189215
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HELRODRAFT_189215
Spliceosome [BR:
hro03041
]
Complex C
Other components
Step II factors
HELRODRAFT_189215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
HA2_N
GIPC1_GH2
XPA_C
Motif
Other DBs
NCBI-GeneID:
20211177
NCBI-ProteinID:
XP_009025536
JGI:
Helro1_189215
UniProt:
T1FQT0
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MDIDKKLEYLSLVSKICTELENHYSLNDKDLAEYIIHLAEKNPTYDSFKKSLYDNGAEFS
DSFIGNLLRLIEKMNPKMKASSCSGIEISEDKSLKKALFPGLSLPDDPSVRTMLEAEVKK
ETTTDANGKKDKKSPSSPSSPVRKKERKHEKRSKRSRSSSRSRRSRSSSRSRRSRSSSQS
RRKSRRYDEEDKYSRKRRNADEDDDSDRKRRHRNEESNKKSRWHEDRDDNKRSRKADDDG
NDHRRKELALEPEVGKIYSGRVTSITTFGCFVQLEGLKKRWEGLVHLSHLRREGRVSNVS
EVVHRGQEVKVKVLTFTGQKTGLSIKDVDQDTGEDLNPSTVDYKKEDISSRNPDRPTTVP
LLEGMIPECDDEDSRKTIKRISSPERWELKQMMAANVLEVADYPDFDEETGILAREDEGS
DEDMEIELVEEEPPFLKGHGRGGMDLSPVKIVKNPDGSLAQAAMMQSALQKERRELKQQQ
REEEQASVPMGLNKNWIDPLPEDGGRQLAASLRGQGVSMEMPEWKRNIMGGTKASFGKKE
KKSILEQRQSLPIYKLKDALNMAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMMPTNVPE
IQRTNLASTVLSLKALGVNDLLGFDFMDAPPMQTLISAMEQLHALSALDDEGLLTRLGRR
MAEFPLDPQQSKMLIMSVHLGCSDEVLTIVSMLSVQNVFYRPKDKQGLADQKKAKFHQPE
GDHMTLLAVYNSWRNNKFSSAWCYENFVQVKTLKRAQDVRKQMLGIMDRHQLDVVSCGKN
TARVQKAILSGFFSNAAKKDPQEGYRTLVDSQLVYIHPSSSIFNRQPDWVVYHELVLTTR
EYMRQVTAIDPKWLVEFAPKFFKFSDPTKLSKTKKSQKIEPLYNKYEDANAWRISRAFKK
FHVKVTF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacaaaaagttggaatatttatctctggtctcgaaaatctgcacggaactc
gaaaatcattacagcttaaatgacaaagatttggctgaatatataattcacttggctgag
aagaatccaacatatgattcattcaagaaaagcttatatgacaatggagctgagttctct
gattcgttcattggaaatctgctaagacttattgagaagatgaatccgaaaatgaaagca
tccagttgttctgggattgaaatatctgaagataagagtcttaagaaggccttgtttcct
ggtctgtcactgcccgatgatccgtctgttaggaccatgttggaagcagaagtcaagaag
gaaactacaacagatgcgaatggtaagaaagacaaaaagtcaccgtcgtccccatcttct
ccagttaggaagaaagaaagaaagcatgagaaacgaagcaagaggtccaggtcatcatca
agaagcagaaggtcaagatcatcgtcaagaagcagaaggtcaagatcatcatcacagtca
agaaggaagagcagaagatacgatgaagaggataaatattcaagaaagaggagaaatgct
gatgaggatgatgactctgataggaaaagaagacaccgtaatgaggagagcaataaaaaa
agtaggtggcatgaagaccgggatgataataaaagaagtagaaaggcagatgatgatggc
aatgatcatagaagaaaagagttggctttggagccagaagttggcaagatatacagtggg
agagttactagcatcaccacgtttggttgttttgtccagttagaaggactgaagaagaga
tgggagggactggttcacttatcacatttgaggagagaaggcagagtttcaaatgtatca
gaggtagttcacaggggtcaagaggtcaaggtcaaagtgctgacattcactggtcagaaa
actggcttgagtattaaggatgttgatcaggacacaggagaggatttgaatccttcaaca
gttgactacaagaaggaagacatcagttcaagaaatcccgacagaccgaccacagttcct
ttattggagggaatgattccagagtgcgatgacgaagacagtcggaagaccatcaagaga
atttcttcacctgaaagatgggagttgaagcagatgatggcagctaatgtactcgaggtt
gcagattatcctgactttgatgaggagacaggaattttggctagagaagatgaaggatca
gatgaagatatggagattgagttggtagaggaagaaccaccatttttgaaagggcatggg
aggggtggtatggacttgagtcctgtcaaaattgtcaagaatcctgacggatcattggca
caagctgcaatgatgcaaagtgctctgcagaaggaacgtagggaactgaaacagcagcag
cgagaggaggaacaagcatccgttcccatgggacttaataaaaattggattgaccctctt
ccagaagatggtggcagacaactggctgcaagcttgcgaggtcagggcgtctctatggag
atgcctgaatggaagaggaacataatgggaggaacgaaggcctcctttggcaagaaagaa
aagaaatccattttggaacagaggcaaagtttgcctatatataaactgaaagatgcactg
aatatggcacaagcaaaacagcgggctggcagagctggtcgaacgggtccaggcaagtgt
tatcgtctctacactgagcgggcctacagagatgagatgatgccaaccaatgtccctgaa
attcaacgcaccaacttggcaagcaccgtactttcattgaaggcactgggtgtcaacgat
ttgctcggcttcgacttcatggatgccccaccgatgcagacactcatatctgccatggaa
caactccatgccctgagtgcactcgatgatgagggcttacttactcgactggggagaagg
atggcagagtttccattggatcctcaacagtccaagatgttgatcatgtccgttcatctg
ggatgcagtgacgaagtgctgacaatagtctccatgctgtctgtgcagaatgtattctac
agacctaaggacaagcaaggtcttgcagatcagaagaaagccaagttccatcagccggaa
ggtgatcacatgaccttgttagctgtgtacaattcatggaggaacaacaagttctcaagt
gcttggtgctatgagaattttgtgcaagtgaaaactctgaagagagcgcaagatgtcaga
aagcaaatgttgggtatcatggacaggcatcagttggatgtggtgtcttgtggaaagaac
acggctcgtgttcagaaggccatcctcagtggcttcttcagcaatgcagccaagaaggat
ccacaggaaggctacaggactcttgttgactcacaacttgtctacatccatccgtcaagt
tctatattcaataggcagcccgattgggttgtttatcacgaacttgtcctgacaactcgg
gaatacatgcggcaggtgactgcaattgatccaaagtggctcgtggaattcgctccgaaa
ttcttcaaattcagtgacccaacgaaacttagcaagactaaaaagagtcagaagattgaa
cctctctacaacaaatacgaagacgcaaatgcttggcgtatctcgagggcattcaaaaag
ttccacgtcaaagtcaccttttaa
DBGET
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