KEGG   Helobdella robusta: HELRODRAFT_189288
Entry
HELRODRAFT_189288 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
hro  Helobdella robusta
Pathway
hro03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HELRODRAFT_189288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hro03021]
    HELRODRAFT_189288
   03036 Chromosome and associated proteins [BR:hro03036]
    HELRODRAFT_189288
Transcription machinery [BR:hro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HELRODRAFT_189288
   Coactivators
    SAGA/TFTC/STAGA complex
     HELRODRAFT_189288
Chromosome and associated proteins [BR:hro03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     HELRODRAFT_189288
    STAGA complex
     HELRODRAFT_189288
    TFTC complex
     HELRODRAFT_189288
    SAGA complex
     HELRODRAFT_189288
    SLIK complex
     HELRODRAFT_189288
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_EML ANAPC4_WD40 TFIID_NTD2 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_RIG_2nd WDR90_beta-prop_4th RMC1_N WD40_RFWD3 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Cytochrom_D1
Other DBs
NCBI-GeneID: 20211219
NCBI-ProteinID: XP_009025701
JGI: Helro1_189288
UniProt: T1FQX2
LinkDB
Position
Unknown
AA seq 639 aa
MKEFAKQCLVASRISASNLVAINSLAFNPEAMINQFNKLETFITENKELKEDLFDMLTPI
ALHLYSDLLSNGQKEKAVKFILDKRKLLIEDKTFLDIIDGLRDPTNDHINNSNNNSNHNI
NSINNSNNNINSINEESSKQFSKIFTELKARKFQLVLPRKAHEKLTLGFLNNQDNLYIHQ
LLNTYMDVSVTANDDEDDETTATIADRLLNDEDDCDGVTSTSTASKADEKKAKLDLLKKL
SGSISTIAPCLPQICHMHMKTFSKNLTCAAMSPDERFLSCGYEDSLVRVVRIAPNDDGDD
DDDVIGTSATTTTSNISNNGIHSSDLLPPPLSSSSAPSSLSSSSTSLKNDMMTLFGHYGA
VHGVDYFQNGSDSGESSKWLFSCSADKTVRLWNTEEKRNVVVYKGHMYPVLDVASRQSYN
MLVRFAQIAFKPGHPPSDYLFFCCSYHKTNLLTLINWIYFNLLSPISGFFASCSYDQTAK
CVRLMVGHEGPLQAIKFSPDGKMLATAGDDHVVKLWDLGTGSLIKDFRGHGDVIYSLAFN
RDGSLLFSGGMDNSLKMWDVFGSKNHATAATAATTATTTTTTITSMTHTSSSSLLTSSSP
SSPSWSAPLLATSLPNNSCVVHMNFMKHNYLRLLTKQFD
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaaagaatttgcaaagcagtgtttagttgcaagtcgaatcagtgcctcaaaccttgtg
gccatcaacagcctggcattcaatccagaggccatgattaaccaatttaataaattagag
acatttataactgaaaacaaagaactaaaagaggatctttttgacatgttaaccccaata
gctctacacttgtattcagatctacttagcaatggccagaaggaaaaagccgtcaaattt
atattggacaaaagaaaattgttgatagaagacaaaacgtttttggacatcattgatggc
ttgagagatccaactaatgaccacatcaacaacagcaacaacaacagcaatcataacatc
aacagtatcaacaacagcaataataacatcaacagcattaatgaggaaagtagcaagcaa
ttcagtaaaatatttacagagttaaaagcaagaaaatttcagctggtgctacctcgaaag
gcccacgagaaactaacattaggttttctgaataatcaggacaatctctacatccaccag
ctgctaaacacttacatggatgtctccgtcactgcgaacgatgatgaagacgatgaaaca
actgccactattgccgacagattgttaaacgatgaagacgattgtgacggtgtgacgtca
acgtcaacagcatcaaaagctgatgagaagaaagctaagctagatttactgaagaagcta
tcaggaagcataagcacgatagctccttgtctgccacaaatctgccacatgcacatgaaa
accttctctaaaaacctgacatgtgcagccatgtctccagacgagcgtttcctatcatgt
ggctatgaggattcactcgtcagagtcgtcaggatcgcccctaatgacgacggcgacgac
gacgatgacgtcattggcacttccgcaacgacgacgactagcaacattagcaataatgga
attcatagtagtgatcttttgccccctccactatcatcatcatcagcaccatcatcatta
tcatcgtcgtcgacttcactcaagaatgatatgatgacgctatttggtcactatggggct
gtgcatggtgttgattattttcaaaatggttctgattccggcgagagttctaaatggctg
ttcagctgctctgctgataaaacagtcaggctgtggaacactgaagagaaaagaaatgtt
gttgtatacaagggccacatgtatcctgtcctagatgtagcatccagacagagctataat
atgcttgtaaggtttgcacagattgcattcaaaccaggtcacccaccaagcgattacctc
ttcttttgctgttcgtatcataaaacgaatcttctaacgttaattaactggatttatttc
aatttgttaagccccatatcaggcttctttgcgagttgctcgtacgatcagacggccaag
tgcgttcgtttgatggttggtcacgaaggaccattacaagccataaaattctcgccagat
ggcaaaatgctagccacagctggtgatgaccacgtggtgaaactatgggacctgggcaca
ggatcactcatcaaggacttccggggtcacggtgacgtcatttattccttggcgttcaat
agagatgggtcgttattgttttccggcggtatggacaattctttgaaaatgtgggatgta
tttggaagcaagaatcatgctacagcagctactgccgctactactgcaacgacaacaact
actacaattacctcaatgacacatacctcatcgtcgtcattgttgacgtcatcttccccc
tcctccccctcatggtcagccccactgctggccacgtccctaccgaacaacagttgcgtc
gtacatatgaattttatgaagcataattatttgaggctgcttacgaaacagtttgattga

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