Helobdella robusta: HELRODRAFT_189800
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Entry
HELRODRAFT_189800 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_189800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_189800
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HELRODRAFT_189800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
LRR_8
LRR_Zer-1
Peptidase_M26_N
LRR_14
Motif
Other DBs
NCBI-GeneID:
20211382
NCBI-ProteinID:
XP_009030568
JGI:
Helro1_189800
UniProt:
T1FRD5
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MSKLEIEDLAATLFRTGVGEYKISKFLTFAYKGMKLDDEQSAKEIVDAIAKNEDLEALEL
KGNTLGVEASKSIGKALERKTSIKRALWSDLFTGRLKSEIPSALKNLCSGMMIAGARLVE
LDLSDNAFGPNGMLGLTDFLKSESCYSLKELRLNNNGLGIQGGKMLAESLQACYESSVKA
GQPLSLEIFVSGRGRLENEGATALAGAFKSMKSLVEVHMPQNGINHQGVTALAEAFSCNP
DLKILNLSDNTFTERGSVSIAKALEKLKNLEEINFEDCLVRTEGVIAICNALKCSNDNLK
VLILSGNELTMEGAEAVVEAIKKKKNLRELQLNCNQFGEKGIKVLKKCLKQCDKLSTLGS
LSCDTELDSSNLNVKADDVEDDNQKKDQKDVKSDIESFLENPTASQLKSIHDNNRHSITN
YLEDLIDNIDDASIAIMKMAQVCVSDSSSSINSIVYGYADAFYKKAFDEVSFAWVANSIL
LSLGLIKGERKNITLVKDIKGPCILLAHIIVQKYFPPDAKNVLSFFFERNTNLDDFAYLK
EVITQGSVAPK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttggaaatcgaagatttagccgcaactctctttagaactggtgtcggcgaa
tataagatttcaaagtttttaacatttgcctacaaaggcatgaaacttgatgatgaacaa
tcagccaaagaaattgttgatgccattgcaaagaatgaagatttggaagcgttggagttg
aaaggcaacactctgggagttgaggcatccaaaagtattggcaaggctctcgagagaaag
accagcataaaaagagctctatggagtgatttgtttactggcagactcaaatcagaaatc
ccctctgccttgaaaaatttgtgttctgggatgatgatagcaggagcaagattggtggag
ttagatctgagtgacaatgcatttggtcctaatggaatgttgggtttgacagatttctta
aaatccgaaagttgttacagtctaaaggaattgagattgaacaacaatggacttgggata
cagggaggaaagatgctagcagaaagtttacaggcatgttatgagtccagtgtgaaagcg
ggccagccactgtcactcgaaatttttgtttcagggaggggtcgacttgaaaatgaagga
gccactgccctggcaggtgcattcaagtcaatgaaatcattagttgaagtgcacatgcca
caaaatggtatcaaccaccagggggtgacagcattggctgaagctttttcttgtaatcct
gatttgaaaatattgaatcttagtgataatacattcacagaacggggatcagtttctatt
gcaaaagccctggagaagttaaagaacctggaagaaatcaattttgaagattgcctggtt
cgaactgaaggggtcattgcaatctgcaatgcactcaaatgcagcaatgataacctaaaa
gtcctcatattatctggaaatgaattgacgatggaaggtgcagaagcagttgtagaggct
atcaagaagaagaaaaatttacgagaactacaactaaattgtaaccagtttggcgagaaa
ggcataaaagtgttgaagaaatgtttgaagcagtgtgataagttgtccactcttggctct
ctcagctgtgatactgagcttgatagttccaatcttaacgttaaagctgatgatgttgaa
gatgataaccaaaagaaagaccaaaaagatgtaaagtctgacatagaaagttttttggaa
aacccaacagcctcacagctcaaaagtatccacgataataacaggcattccatcacaaac
tatttagaagatctaattgataatattgacgatgcttctattgccattatgaagatggcc
caggtttgtgtgtcagatagcagtagcagcatcaactccattgtttatggctatgcagat
gcattctacaagaaagcgtttgatgaagttagtttcgcctgggtggccaacagcattttg
ctgtcactgggtctcataaagggagaaaggaaaaacatcacattagttaaagatataaaa
ggaccctgcatcttgcttgcacacatcattgtacaaaagtacttccctccagatgcaaag
aatgttttatctttcttttttgaaaggaacactaacttggatgattttgcgtatctcaaa
gaggttatcacacagggctctgtggccccaaagtag
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