Helobdella robusta: HELRODRAFT_189807
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Entry
HELRODRAFT_189807 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
hro
Helobdella robusta
Pathway
hro04142
Lysosome
hro04144
Endocytosis
hro05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
HELRODRAFT_189807
04142 Lysosome
HELRODRAFT_189807
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
HELRODRAFT_189807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_189807
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hro04147
]
HELRODRAFT_189807
Membrane trafficking [BR:
hro04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
HELRODRAFT_189807
Exosome [BR:
hro04147
]
Exosomal proteins
Proteins found in most exosomes
HELRODRAFT_189807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
CH_2
Motif
Other DBs
NCBI-GeneID:
20211384
NCBI-ProteinID:
XP_009030579
JGI:
Helro1_189807
UniProt:
T1FRD7
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MDWHDRIDLETCALCRFVRLPGLKPRRCLKHTYVKIGIRNVIQDKIFKIEFDNVYVVFGF
FRNYPFASDASVTRHILYLFVQFFGLFKLQNAGINAANIGFSTLTMESDKFICVREKVGE
TAQVVIIDMADMQNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKVKAHNMTE
DVIFWKWISVNTVALVTEASVYHWSMEGDSQPQKIFDRHSTLAGCQIINYRTDHKQQWLL
LTGISAQVGDQQANRVVGAMQLYSVERKVSQPIEGHAAAFGQFTIPGNASPSTLFCFAVR
GAASSKLHVIEVGTPAQGNQPFTKKAVDIFFPPEAQNDFPVAMQIGQKYDMIYLITKYGY
IHLYDMETATCIYMNRISGDTIFVTAPHDASSGIIGVNRKGQVLSVSVEEDNLIPYITGT
MQNPDLALRIASRNNLPGAEDLFVRKFNSLFQGGQYNEAAKVAAGAPKGILRTPQTIQRF
QQIPAQQGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSE
ELGDLVKVADPTLALSVYLRANVPNKVIQCFAETGQYQKIVLYAKKVGYTPDYIFLLRSI
MRINPEQGVQFAQMLVQDDEPLADINQASTKLLIEYNSIIVDVFMETNMVQQCTAFLLDA
LKNNRPAEGPLQTRLLEMNLMFAPQVADAILGNQMFTHYDRAHVAQLLKRKDEFLKRFLT
SLRRGIFMVKKIEKCNKKALEHYTDLYDIKRAVVHTHLLNPDWLVNYFGSLSVEDSLECI
KAMLQANIRQNLQICVQIATKYHEQLTTQALIEIFESFKSFEGLFYFLGSIVNFSQEAEV
HFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDYVHDL
VLYLYRNGLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDAIKQLILVVKGQFSIDELVA
EVEKRNRLKLLLPWLETRIHEGSIEPATHNALAKIYIDSNNNPERFLRENQYYDSKVVGK
YCEKRDPHLACVAYERGSCDMELINVCNENSLFKSEARYLVRRRDPDLWAHVLNEENEYR
SQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDNSMFSDHRHEFSL
LFFKPFAFLYNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKF
EVNASAIQVLINNIKNLDRAYEFAEKCNEAAVWSQLARAQLNSGMVKEAIDSYIKADDPT
QYMEVVSVASKSNNWEDLVKYLQMARKKARETYIETELVFAYAMTNRLADLEEFISGPNH
ASITQVADRCFDNKMYEAAKLLYNNVSNFARLAITLVHLGEYQGAVDSARKANSTKTWKE
VCFACLDNEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELISLLEAALGLERAHMG
IFTELAILYSKYKPQKMREHLELFWSRVNIPKVLRAADQAHLWSELVFLYDKYEEYDNAI
ITMMNHPTDAWKESHFKDIITKVANIELYYRALQFYLDYKPLLLNDLLLVLTPRMDHTRA
VSFFKKAGHIALVKPYLRAVQNNNNKAVNEALNNLLIEEEDYQGLRASIEAFDNFDNIGL
AQRLEKHELIEFRRIGAYLYKGNNRWKQSVDLCKKDKLFKDAMLYACESRNADIAEELLS
WFLEDKNYECFAACLFQCYDLLHPDVILELAWRHNIVDFAMPYLIQVMREYTTKVDKLEQ
ADAVRSEEEQKATDKPLVLNEPQLMITAGPSVIPGQVYGAPGPIYPGAYGMPGYGMPPMR
LAFSGAPSRVTARVGRHLRT
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggactggcatgaccgtatcgacttggaaacatgtgcactgtgtaggtttgtaagatta
cctggtttgaaacccagaaggtgcctaaaacatacttatgttaaaatcggaatcaggaac
gtgatacaagacaaaattttcaagatcgaattcgacaacgtttatgttgtctttggtttt
tttcggaattacccatttgccagtgacgcctctgtgacacgccatatcttatatttattt
gttcaatttttcgggttgttcaaattgcagaatgctggaatcaatgcagccaacattggc
tttagtactcttacaatggagtcagataaatttatttgtgttcgagaaaaagttggagag
acagctcaggttgttatcattgatatggcagatatgcaaaatcctatcagaagaccaatt
tcagctgattcagccatcatgaatcctgccagtaaagttatagccctcaaagctggaaaa
actttgcagatatttaacattgaaatgaaaagtaaagtgaaagctcataacatgactgaa
gatgtcatattctggaagtggatcagtgtcaatactgtagcactggtgacagaggcatct
gtttatcactggagcatggaaggtgactcccagccacagaagatttttgacaggcattca
acattagctggatgtcaaatcataaactatcgaactgaccataaacagcagtggttgtta
ttgacgggcatttctgcgcaagttggtgatcagcaggcgaatagagttgttggagccatg
cagctgtacagtgttgagaggaaggtcagtcaaccgattgaaggtcacgcagcagctttt
ggacaattcacgattcctggcaatgcatcaccctcaacattgttctgctttgctgttcgt
ggagctgcttctagcaagttgcacgtcattgaagttggcacaccagctcagggtaatcaa
ccattcactaaaaaagctgttgacattttcttccctcctgaagctcagaatgatttccct
gtcgccatgcagattggccagaagtacgacatgatctacctgatcaccaaatatggatac
attcatctgtatgacatggagacggctacttgtatctacatgaataggataagtggcgat
acgatttttgttacagctcctcatgatgcctcatctggtatcattggtgtcaacaggaaa
ggacaggtcttatcagttagtgtggaagaggataatttgatcccatacattaccggcacc
atgcaaaatccagatctggcgctaagaattgcatctagaaacaatttgccaggtgccgaa
gatttgtttgttcgcaaattcaacagcttgttccagggaggacagtacaatgaagctgca
aaagtagcagctggtgctccaaagggcattctgagaacaccacagaccattcagagattt
caacagataccagcccaacaaggtcaaacatctccattgctgcagtactttggcatcctt
ttggaccaaggtcaattgaataagtatgaatcacttgaactgtgtagaccagtacttcaa
cagggtcggaaacaactgcttgaaaagtggctgaaagaggataagttggagtgcagtgaa
gaacttggtgatttggtaaaagtagctgatccaactttagctctatcagtctacttaaga
gcgaatgtgcccaacaaggtgattcagtgttttgctgagacaggccagtatcaaaagata
gtactgtatgcaaagaaagtgggatatactccagactacatcttcttgttgagaagtatc
atgcgaatcaatcctgaacaaggtgttcaatttgcacagatgctagtgcaagatgatgaa
ccccttgctgacataaatcaggctagtacaaaattgttaattgagtacaattcaattatt
gtagatgtcttcatggagacaaacatggttcaacaatgtacggcatttctcttggatgct
ttgaaaaataatcgaccagcagaaggtccactgcaaacaagattgttagagatgaacctg
atgttcgcccctcaggttgcggatgcaattttaggcaatcaaatgttcactcattatgat
agggctcatgtagcccaactgttgaagcgcaaagatgagtttctgaagcgtttcttgaca
agtctgaggagaggaatctttatggttaaaaaaattgaaaagtgcaataaaaaggctctg
gaacattacactgatctgtatgatataaaacgagcagttgtgcatactcatctgttgaat
ccggactggttagtgaattattttgggtcattatccgtggaggactccctggaatgtatt
aaagcaatgcttcaagcaaatatacgtcaaaacctgcaaatttgtgtgcaaattgctaca
aaatatcatgaacaacttactacccaagctctaattgaaatatttgaatcattcaagagc
tttgaaggtcttttttattttcttggatctattgtgaacttctcacaagaagcggaagta
catttcaagtatatacaagctgcttgcaagacaggtcaaatcaaagaagtggaaagaatt
tgcagagagagtaattgctacaatcctgaaagagtcaaaaactttttgaaggaggcaaaa
ttgacagaccaactgccactgataatcgtttgcgatcgatttgattatgtccatgatctt
gtgttatacttgtatcgtaatgggctccagaaatacattgaaatttatgttcaaaaggta
aatccatcaaggttgcctgttgtcgtcggtggtctacttgacgtcgactgctcagaagat
gctataaagcagctaatacttgttgtaaaaggacaattttcaatcgatgaattggttgct
gaggttgaaaagcgaaataggctgaagttgcttttgccttggctggaaactcgcattcat
gaaggaagcattgaacctgccactcacaatgctttggcaaaaatatacattgacagcaac
aacaaccccgagagattcttgcgtgagaatcagtactacgacagcaaggttgttggcaaa
tactgtgaaaagagggacccgcatttggcgtgcgttgcctatgaaagaggatcttgcgat
atggagctcatcaatgtttgtaacgagaattcattgttcaaaagcgaggctcgttatttg
gtccgcagaagagaccctgatctctgggctcatgttctaaatgaagaaaatgaatacagg
agccagctcattgatcaggtggtacagacagctctgtcagaaacacaagaccctgaagac
atttcagttacagtgaaagcattcatgactgctgatctgcccaatgaactcatagaactg
cttgagaagattgtcctggacaactctatgttcagtgatcacaggcatgaattttcttta
ttattttttaaaccttttgcttttctatataatttgttgatcttgacagccatcaaagct
gatcgaactagggtgatggagtatataaacagattggataactatgatgctccagacatt
gccaacattgctattagtaatgaactgtttgaagaggcttttgccattttcaagaagttt
gaagttaacgcttcagcaatacaagttttaataaacaacattaaaaacttggatcgggct
tatgaatttgctgaaaagtgcaatgaggcagccgtgtggagccagcttgctcgtgctcaa
ctgaacagtggaatggtgaaagaggccattgattcctacatcaaggctgatgatccaact
cagtacatggaagttgtttctgttgccagcaagagcaacaactgggaagaccttgtcaag
tatctgcaaatggctcgaaaaaaggctcgcgaaacatatatagaaacagaactggttttt
gcttatgccatgactaacaggctagcagatttagaagagttcatatctggtcccaaccac
gcatctatcactcaagtcgcagatcgctgttttgataacaagatgtatgaagctgctaaa
ttactgtataataatgtttccaactttgcccgattagcaatcactttggttcatcttggt
gagtatcagggagctgttgacagtgctcgcaaggccaacagtacaaaaacttggaaagaa
gtttgctttgcctgcttggataacgaagagttcagactcgcccaaatgtgcggcctgcat
attgttgtgcacgcagatgaactggaggaacttatcaactactaccaggaccgtggctac
tttgaagagctcatatcactccttgaggctgctctaggtctcgaaagagcacacatgggc
atattcactgaactagcaatactgtattccaaatataagccacaaaagatgagagaacat
ttagaattgttttggtctagagtcaacatacccaaggttttgagagcagcagatcaagct
cacttgtggtctgagttggtctttttgtatgacaaatatgaagagtatgacaatgcaata
attactatgatgaaccacccaactgatgcttggaaggaatcacatttcaaagatattatc
acaaaggtggctaacattgagctgtattacagagccctacaattctatttggactacaag
cccctgcttctcaatgatttgttgctagttctcacacctcgcatggatcacaccagagca
gtcagttttttcaaaaaagctggtcatatagcattagtgaaaccctatttaagggcagtt
caaaacaacaacaacaaagctgtcaatgaagcactcaacaatcttcttattgaggaagaa
gattaccaaggattgcgagcttccattgaagcttttgacaactttgataacattggtttg
gcacaaagattggagaaacatgaactaatagaatttcgacgcattggagcttatctttat
aaaggtaacaaccgctggaagcaatctgtggatctttgcaagaaagataaactctttaag
gatgccatgttgtatgcctgtgaatcccgaaatgcagatattgcagaagaattgttgtca
tggttccttgaagacaaaaattatgaatgttttgccgcatgtctcttccaatgttacgat
ctacttcaccctgacgtcatattggaactagcttggagacacaatattgttgattttgct
atgccatacctcatacaagtcatgagggaatacactaccaaggtggataagttggagcaa
gctgatgctgtccgttctgaagaagagcaaaaagctactgataaacctcttgttctcaac
gaaccacagctgatgataacagctggtccaagcgtgataccaggacaagtatatggagct
ccgggcccaatatatccaggtgcttatggaatgcctggatatggcatgcctccaatgcga
ttggcgttttccggtgcgccaagtagggttacagctcgagtaggccgtcacctaagaacc
tga
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integrated database retrieval system