Helobdella robusta: HELRODRAFT_189931
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Entry
HELRODRAFT_189931 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14307
nucleoporin p58/p45
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_189931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_189931
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_189931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
Retrotran_gag_4
TssO
Motif
Other DBs
NCBI-GeneID:
20211426
NCBI-ProteinID:
XP_009031533
JGI:
Helro1_189931
UniProt:
T1FRH9
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MQQPLGLGFSGFGGGGSLLGGSAAPASSVPTGLGGFSGFGQASNASSNGFSLGGGGTSQP
QQSTAFFGLPAATTSTTGALPDPVLGGGLALTMTTTSALTFGFNSLSAQSVAAATTTTNI
FSNSSTQQFQGLGGTDFKPLSSGASAVTTDNSKISSGTVKSVKDHIILPTFISLVEDFNK
NVRSQKSIRESISRSSQKSLLKIEEDVRDLRQQMNFVAASLQKISTCVDSLKKESTQELR
NAEIAQRTNDLSQHMLQSDYKSPYEYFQNLLVKFEQEMDLCRTQFSEVETYLESLNSNNL
ATPAELSCIFDKLNEGFLFLAAKLQVVHELVKAKKELFQSYKRNDIYSDRVDFFKAPSSK
IINKNNATTDDINNINSTLNNALSSIIKSSISSNVSSSSGVNAVVSSGSGSVSGSSRAAS
LNPFPYINNMASTAMTSAVGSQQQQQQPGSIGLFGQQQQQQQQQLQQQNKMLKHNLFNSN
RNQNNNADDSSSFVLGSNLNNDANLKIGCKRGKPLS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcctcttggtcttggttttagcggttttggtgggggcggaagtttgttagga
gggtcagccgctccggccagctctgtcccaacaggacttggtgggtttagcggattcgga
caggcttctaatgccagctctaatgggttttcattaggagggggcggaacatctcagcca
caacagtccactgctttctttggtttaccagctgctactacatctaccacaggtgctctt
cctgacccagtattgggaggtggcctagcactaaccatgactactacatctgctctgacc
tttggcttcaacagcttatcagcacagtcagttgcagcagcaacaacaacaactaacatc
ttctcgaactcatccacacaacaatttcaagggcttggtgggacggatttcaagccattg
tccagtggagcgagtgcagtcactacggacaattctaaaattagcagtggaactgtcaag
agtgtgaaagaccatatcattctacccacattcatatctcttgttgaagatttcaataag
aacgttcgatctcaaaagagtattcgcgagtcgatatcccgttcgtcacaaaagtcgttg
ctgaagatcgaagaagacgtcagagacctgaggcagcagatgaatttcgtggctgcatcc
ttgcagaaaatttcaacgtgcgtcgattcgctgaagaaagaatctacccaagagctgaga
aatgcagagatagcccagaggacgaacgacttgtcccagcacatgcttcagtctgattac
aagtcgccttatgaatacttccagaacttgttggtgaagttcgagcaagagatggacttg
tgcaggactcagttcagtgaggttgagacctacctggaatctctcaactccaataactta
gccactcccgccgaactctcatgcattttcgacaagttgaacgagggcttccttttcctg
gccgccaaactacaagtagtccatgaactcgtcaaggccaagaaagaattattccaaagt
tacaaaagaaacgacatatactcagacagagttgatttctttaaggcgcctagtagcaaa
attataaataaaaataacgccactacagatgatataaacaacatcaatagtactttaaat
aatgccctaagtagtattattaaaagtagtattagtagtaatgttagtagtagcagtggt
gtcaatgcagtcgtcagcagtggtagtggtagcgtgagtggtagcagtagggcggccagt
cttaatccatttccctatataaacaatatggcctcgactgctatgacgtcagcagtcggt
tcgcagcagcaacaacaacaacctggttccataggattgtttggtcaacaacagcagcaa
caacaacagcagctgcagcagcagaacaaaatgttgaagcacaatctcttcaacagcaac
cgcaaccagaacaacaatgcagatgacagtagtagctttgttctcggctccaatctgaac
aacgacgccaatctgaaaattggttgcaaaagaggaaagccattgagttga
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integrated database retrieval system