Helobdella robusta: HELRODRAFT_190144
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Entry
HELRODRAFT_190144 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
hro
Helobdella robusta
Pathway
hro03030
DNA replication
hro03410
Base excision repair
hro03420
Nucleotide excision repair
hro03430
Mismatch repair
hro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HELRODRAFT_190144
03410 Base excision repair
HELRODRAFT_190144
03420 Nucleotide excision repair
HELRODRAFT_190144
03430 Mismatch repair
HELRODRAFT_190144
03440 Homologous recombination
HELRODRAFT_190144
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hro01009
]
HELRODRAFT_190144
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hro03032
]
HELRODRAFT_190144
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_190144
Protein phosphatases and associated proteins [BR:
hro01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
HELRODRAFT_190144
DNA replication proteins [BR:
hro03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
HELRODRAFT_190144
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
HELRODRAFT_190144
MMR (mismatch excision repair)
DNA polymerase delta complex
HELRODRAFT_190144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
20211502
NCBI-ProteinID:
XP_009010988
JGI:
Helro1_190144
UniProt:
T1FRQ5
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MVPADVLSFIKESLEDENKILSFKSLSISLCIPQCQAKKYLQYYADSNKKNVQVTYCIVG
QVSDADRPDSKVLKVCLSDAAGKNDLMKTFFSKPSCQVYSIQKSKLNNHSLLYSFDYDAS
KNLTFGDRNLFSIKLENVSMHVFKYLSKPAQPQVDARKPQKLQTSIPQKTDSQKSDLVAK
RSNGVASFFSKNKTEPPTEPANKTGAENALKDKSSDKTNSETTKQAGKQNSGTQDTKSLS
ALFSNHAKKAKPPANESSQRSDSQHSEVSEKSLKASQTKVEEVNKNAKNKSNIKIDNGKK
SKKSKNSHPAKRRRRIIADSSDEDDDSDDSEDEHRISEDDDEEEVMQTNPYNESQDMFDD
EPCQETSNMQSSSHQRSQASSTSSNKRKLSPDSQSDTDEKHETKRKPSNNNCNNNNNSVS
QAVKKKKVLETNTYLDDDGFMVTEKVHQSVDVVVAAAAVADDDEDGSRKNDEKEITITNN
SSHKTNGNNLHATKIDELKTEVKKNSDSGRGSNGTSKKQPQQATKKKTLATAATNKKQAT
IGNFFTKK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtgccagcggacgttttgagtttcataaaagaatctttagaagatgaaaacaaaatt
ctatcatttaaatctctaagtatttcgctctgcattcctcagtgccaggcaaaaaaatat
ttacaatattatgctgattccaacaagaaaaatgtgcaagtgacgtattgcatcgttggc
caggtctcggatgcggacagacctgactccaaagtcttaaaagtatgtctgtctgatgca
gcaggaaagaatgacctgatgaaaacatttttctcaaagccctcatgtcaggtgtacagc
atccaaaaatctaaattaaataatcattctctcctttattcgtttgattatgatgccagt
aagaatttaacatttggggatagaaatttgttcagcatcaaattggaaaatgtttcaatg
catgtgttcaaatatctctcgaaacctgcacaacctcaagtcgatgctagaaaaccacaa
aagttgcaaacttctattcctcagaaaactgattctcaaaaatctgatttagttgctaaa
agatctaatggtgttgcttcattcttttctaaaaacaagacagaaccaccaacagagcct
gctaacaaaactggtgcagaaaacgcgttaaaagataaatctagtgacaagacaaacagt
gaaacaacaaagcaagcaggcaaacagaattcaggaacacaagacacaaaaagtttatct
gctctgttcagtaaccatgcaaagaaagcaaaacctcctgccaatgagtcgtcacagagg
agtgattctcaacattctgaagttagtgagaagagtttaaaagcatctcaaaccaaagtt
gaagaagttaataagaatgctaaaaataaatcaaacattaagatagataatggcaaaaag
tccaaaaagtctaaaaacagccatccagcaaaacgaagaaggagaataattgcggacagt
agtgacgaagatgatgacagcgatgacagtgaggatgaacatagaatcagtgaagatgat
gatgaagaagaagtgatgcaaacaaatccttacaacgaatcccaggacatgttcgatgat
gaaccctgtcaggaaacttcaaacatgcagtcttcatcacatcagaggtcacaagcatca
tcaacttcgtcaaacaagagaaaactatctccagattctcagtcagacaccgatgaaaaa
catgaaactaaaagaaaaccaagtaacaacaactgcaacaacaacaacaactcagtcagc
caagctgtgaagaagaaaaaagttttagagacaaacacctatctagatgatgatggcttc
atggttactgagaaggttcatcagagtgtggatgtcgtcgttgctgctgctgctgttgct
gatgatgatgaagatggtagccgaaaaaacgatgaaaaggaaattacaattacaaacaat
agtagccataaaactaatggaaataatctgcatgcaactaaaattgatgaacttaaaact
gaagttaagaagaattcagacagtgggcgcggtagcaatggcactagtaagaaacagcca
cagcaggccactaaaaagaagacgctggcgacggcagccacaaataagaaacaagccact
attggaaatttcttcactaaaaaataa
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