Helobdella robusta: HELRODRAFT_190472
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Entry
HELRODRAFT_190472 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K08131
collagen type IX alpha
Organism
hro
Helobdella robusta
Pathway
hro04512
ECM-receptor interaction
hro04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
HELRODRAFT_190472
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
HELRODRAFT_190472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hro00535
]
HELRODRAFT_190472
Proteoglycans [BR:
hro00535
]
Extracellular matrix (ECM) proteoglycans
Others
HELRODRAFT_190472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF5929
Motif
Other DBs
NCBI-GeneID:
20211602
NCBI-ProteinID:
XP_009012458
JGI:
Helro1_190472
UniProt:
T1FS05
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MNLSPAYSFNTFFTYVTIILLLATYLQSADGDDVTCPTISSSYNLLEKFNLNDPDSVATT
ITGISKQTTAYHFSKNANFQIESDSVFPDPLPEKFLLTIVFRLTGRLPKRIFDLIHLENE
EGDVVFAIHLDIMGQTMYLTVPSADGEPMTVEFDKEPLSSRLYEKNWQRLQIIFEPGKIE
IYMDCIKLTTSLVEYSLNIAGTMTFVGWKDGIDSAPIDLQSVFMHCDTKLSKDGCIDYAS
STTTTTTTTILPISIMVPSGFETSGGQCTVKCPQGPVGPQGHPGVPGQMGYKGEKGDKGI
QGPPGAAAVIEEDQLEKLKGSKGFKGDKGDSGLKGEQGPPGQGVSLSGKLDKTFQQELKN
LVKTIPGLKGEPGPEGLVGRAGNPGDRGETGEPGPPGEQGEPGKDGMDGKHGSKGEKGDM
GPMGKPGETGPPGPKGPTGDRGKLGPQGRPGTQGQPGHPGQPGNPGNPGQQGPPGSSTNF
ELTQLISFLNNNENDTISTRFSKLMKGAPGNPGPMGPMGPAGAAGEQGPPGSQGQPGSRG
AAGQPGNPGATGQAGQPGPPGSAGRDGIPGKNGPPGQPGNPGPPGRTPTKSEIKEACFKV
LEERMDEIVRDLRGPPGPPGEGRPGKPGPLGPQGLTGDPGPRGIEGPRGPPGAPGDVDYG
EVARRVKTMLKKKSSHKNDEKAFFS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcgccagcttattcgttcaacacgtttttcacttatgtaacaataatcctg
ttactagccacatacttgcaatctgctgacggtgatgatgtcacttgtccgacgatctcc
tcatcgtacaacctgttggaaaagttcaacctaaacgatcctgattccgtagcaacaaca
atcacgggcatctctaaacagaccactgcataccatttctccaagaacgccaacttccag
attgagtctgactctgttttccctgacccgctacccgaaaaatttcttctgaccatcgtc
tttcgactgaccggtcgtctgccgaaaagaatttttgatttgattcacctggaaaatgaa
gaaggtgacgtggtgttcgccatccacctggacatcatggggcagaccatgtacctcact
gtgccctctgctgacggagagcccatgactgtcgagttcgataaagaaccactcagtagt
agactgtacgagaaaaactggcagaggctgcagatcatatttgaacccgggaagattgag
atctacatggactgcataaaactgaccacatctctcgtggaatactctttgaacattgct
ggcacgatgacctttgttgggtggaaagatggaatagacagtgcaccgatcgacttgcag
tctgttttcatgcactgcgacacgaagttgagcaaggatggatgcattgattatgcctca
tcaactacaacaacaacgacaacgacaatccttccaatttccatcatggtgccatcagga
ttcgaaacaagtggtggtcagtgcactgttaaatgtccacaaggtccagttggcccacag
ggccatccaggtgttccaggacagatgggctacaagggagaaaagggagataagggcata
cagggaccgccaggcgctgcggctgtgatagaagaagatcaacttgagaagttgaaaggt
tccaaaggctttaagggtgataaaggagattctggactgaaaggagaacaaggtccacca
ggccagggggtatcactctccggaaaattggacaaaactttccaacaagaactgaaaaac
ttggtaaaaaccatcccgggattaaaaggggagccaggaccagagggacttgttggaaga
gcgggcaatccgggtgacaggggtgaaactggcgagcctggaccccctggcgaacaaggt
gagccaggaaaggatggcatggacggaaagcacggaagtaaaggagaaaaaggagatatg
ggccctatgggaaagccgggcgagacaggcccccctggtccgaagggtccaacgggagac
agaggcaaactcggtccccagggaagacccggcactcagggtcaaccaggacacccgggt
caaccaggcaacccaggcaatcccggacagcaagggcctcccggatcttcaacaaatttc
gaacttactcaactaatctcatttttgaataacaacgagaacgacacgatatcgacgaga
ttctcgaaactcatgaagggagctccagggaatcccggacccatgggacccatgggacct
gcaggtgcagccggcgaacaaggtcctcctggttcgcagggacagccaggatcgagggga
gctgctggtcagccgggaaacccaggcgcgaccggacaagcaggccaaccgggaccacca
ggatcagcaggtagggatggcatccctggtaagaatggacctcctggtcaacctggaaat
cctggtccaccgggaaggacgcctaccaaatcagaaatcaaagaagcatgctttaaagtt
ttagaagaaagaatggatgagatcgtgagagatttaaggggtcctcctggtcccccggga
gagggaaggcccggaaaacctggccctcttgggccacaaggattgacaggtgacccaggg
ccgaggggcattgaagggccgcgtggtccccctggtgcccctggtgatgtcgactacggg
gaggtagccagaagagttaagaccatgcttaaaaagaaaagttcccacaagaacgacgaa
aaagcattcttcagttga
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