Helobdella robusta: HELRODRAFT_190644
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Entry
HELRODRAFT_190644 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
hro
Helobdella robusta
Pathway
hro03430
Mismatch repair
hro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HELRODRAFT_190644
03460 Fanconi anemia pathway
HELRODRAFT_190644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_190644
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
HELRODRAFT_190644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
20211656
NCBI-ProteinID:
XP_009012879
JGI:
Helro1_190644
UniProt:
T1FS59
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MSIKSIIRLSEDVINRIAAGEVIQRPANAVKEMLENCLDAGSTNVSIILQEGGLKYLQIQ
DNGSGIPKEDMDIVCERFTTSKLKKFEDLTNISTYGFRGEALASISHVAHITIVSKTSDS
LCAFKGTYSDGKLKESLKPCAGNVGTQIIVEDLFYNVPTRRLILKNATEEYQKIVDVVTR
YAIHNPNVGFLVKKQNETNPDLKTQSGSSRLDNIALLFGSSIAKEILSFEHEDKKLSFKL
AGCATNANYSSKKRAFILFINHRSVESTDLRKAVESVYNAYLPKGSYPFVYISLEISPQN
IDVNVHPTKSEVHFMYESEIFDCVQRQLDSCLLGSNTSRTFYTQTMLPLKIIEEKPKNTS
SSSSSTIADNARKNQRSSIGNSLNTSAHLTIRTDHKARKIDSFLVGKFNKGQILNGNADD
DDGGGDNDGKDGGGGGDDDDVGDRRIVSAMEIDVTELSPSNSINNNNNKSNNNNNNNAAK
KRNIKLTSILQLRKEIESNIHSGIREIIRNSTFVGCVDLEWCLIQHQTKLYLMNINKMSK
EFFYQILIEDFGNFGVIKLSQPASIYELSILGLDDERNGWSRKDGSKDNLSKFVVELLSS
KSAMLWDYLSIKIDVENGDLLSLPLIMDNLTPDLDDLHTFVLRLATEVNWDKEKPCFKTL
CREISSFYVFKNEIKSSNNDNNNKVDSNENTRSINSNSKNPEVIENGSSDDARVEEKKWT
IEHVIYPALKSFFLPPKSSADDGSLLQVANLPDLYKVFERC
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaatcgataattagattaagcgaagatgtcataaacagaattgcggctgga
gaggtcatccaacgtccagctaatgctgtcaaagaaatgcttgaaaattgtttagatgct
ggttcaacaaatgtttcaataatattacaagaaggtggactaaagtacctccaaatacaa
gacaatggttctggaataccgaaagaagatatggatatagtatgcgaacgattcaccacg
agtaaattaaaaaaatttgaagaccttacaaacatttcaacctacggcttcagaggtgag
gccctagccagtataagccatgtggcccacataaccatcgtttccaagacctctgattct
ctttgtgcatttaagggtacatattcagatggcaaattaaaagagtccttaaaaccatgt
gctggtaacgtcggcactcaaattattgtggaggacctattttacaatgtcccaaccaga
cgattgatcctaaagaatgcaacggaagaatatcaaaaaattgttgatgtcgtaacaaga
tatgccatacacaatccaaatgttggttttcttgtaaaaaagcaaaatgagactaaccca
gatttgaagacccagtcaggcagtagtagattggataacatagccctactctttggatcg
tccattgctaaagagatcttatcatttgaacatgaagataagaaattgtccttcaaatta
gctggatgtgcaacaaatgccaactactcttctaagaaaagggcctttatcctattcatc
aatcatcgcagtgttgaatcaacagatctacgcaaagcagttgagagcgtttacaatgct
tatctacctaaaggaagttacccatttgtttacatcagtttagaaatcagcccccagaac
attgacgtaaacgtgcacccaaccaagagtgaggtccatttcatgtacgaatctgaaatt
ttcgactgcgttcagaggcagttggattcgtgtttgctgggctccaacacatctagaaca
ttctacacgcaaacaatgctgccattgaaaataatcgaagaaaagccaaaaaatacgtca
tcgtcatcatcgtcgaccatagcagacaatgcaagaaagaaccaaagatcatcaataggt
aacagcttaaacaccagtgctcatttgaccatacgaactgaccacaaagccagaaagata
gactcgtttctcgtcgggaaattcaataaaggccaaattctaaatggcaacgctgatgac
gatgatggtggtggtgataatgatggtaaagatggtggtggtggtggtgatgatgatgat
gtcggggatcgccgaatcgtttccgctatggagattgatgttaccgaattatctccttca
aattctatcaataataataataataaaagcaacaacaataataataataatgcggctaag
aagagaaacataaaattgacgagcatactccagctaagaaaagaaattgaaagtaacata
catagcggaataagagaaataataagaaactctacgtttgtcggctgcgttgatttggaa
tggtgcctaatacaacaccagaccaaactgtatctcatgaatattaataagatgagcaaa
gaatttttctatcagattttaattgaagattttggtaactttggtgtcatcaaattgtca
caaccggcatccatctacgagttatccatattgggattggacgacgagaggaatggctgg
agcaggaaggatggctcgaaggataacttatccaaatttgtagttgaactactgtcatcc
aagtctgccatgctttgggattatttatccatcaagattgatgttgagaacggtgaccta
ctatctctgcctctgataatggataacctgacccctgacctcgatgacctacatacgttc
gtgttgcgattggccacagaggttaactgggacaaagagaagccatgcttcaagacactc
tgtcgcgaaattagctcgttttatgtcttcaaaaacgaaattaaatcctcgaataatgat
aataataataaggttgatagtaatgaaaatacgcggtctataaatagcaattctaaaaac
ccggaggttattgaaaatgggagcagtgacgatgcgcgcgtggaagaaaaaaaatggacg
atcgagcacgtgatttatcccgcccttaaaagtttcttccttccgccgaaatcgtctgct
gacgatgggagtctgttgcaagtggccaacctacccgacctctacaaagtttttgaacgc
tgctga
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