Helobdella robusta: HELRODRAFT_190815
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Entry
HELRODRAFT_190815 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_190815
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hro04040
]
HELRODRAFT_190815
Membrane trafficking [BR:
hro04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
HELRODRAFT_190815
Ion channels [BR:
hro04040
]
Other channels
Mechanosensitive channel (Piezo)
HELRODRAFT_190815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
20211710
NCBI-ProteinID:
XP_009013716
JGI:
Helro1_190815
UniProt:
T1FSB3
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MNMRRIYLYIKRTYHELANLLWRILEVHMSKIIVIFIIVVCTYDVCALNVLLLLVALILY
PLNFHHTLSILTMFYSSFIIITRMVYQLSIFEEKTFTTECLFKQAEYDVIAYNGTVSAVA
YFGYRKTNNIFFEVKLYVCLVILLALEMVISTRQKQHYNHPRHLRPYKGVIFYGVNRGNA
DVTVTSWLKFFANYGFYKFGKEICFIFVVIVMTTRLDAFSLVHGLLLGCLIFLRRWACRR
VWPVYIFLLIIAVFVQYLSCLGLPKSLCIDYPWNLNGYSKVFTRNLKVFLFLPDYVLPPY
ALKIIGCSYLDYVKVGVFYYSFWLTLLILFIAGTFRVNLLCLGYLLGCFFFLWHGQSLLL
KPLKHIKKMANHVVLYFLCYHGQVCFAGSRPQFDREKLGFAWDAMGFAMVLLLLRIHKSW
FFQHVVNELHVDSVLASRGSELIVEMTQRRIETQRKYEMSILDKIRLKVERIRENLLKKQ
EATNQPIVQYADHYQVIRSGDYYMFEHLDLDSNSSEVKDEDILSTEAQKKMAKTPTVAEL
FNIVSIANMETAIKFWSDWMRENRPKNDGEKKEGKKRDVEEEGREGDGHGVEEEDLQEGT
SDGTVIVRPHHKPVVPENENLLAIIKDVTGAKNLVPSDVDPPVKQKRSVAQTIRISFYFG
YIVTWAGAEQLIVFLNSLAQDYISISDILFEEKQKIKKATILYRSNLLSEDSFHEEPADW
ASHHHHRQYTDHQHPHSPDAASPIDDDKAVLTTTTPSTTADQPPQQLSFKYKLKTFDPFT
EIKKIAHLLQSSSAQDLASSQQDQPQTPTSQPPSLPPHHHHHLALPLVIFNSCYTVFLSN
SELLCYFAMVLNAIVYGSILSVVYPVTAILWAMMTCPRPSKRFWLFAIGYTEICIIVKYV
YKFVSPYTDQPDVVNKDTLFQWPYMLGLANMTHFDIFLLFCLFFHRSVLMMQPKQKLEDP
EDEMAVLAAPKPSRPAPSPSSAEQEASSPSSLPPLTGQPSTLRKRNVKKFKNKNEKGKID
DGVDGRDAEVVDGDAREKKSDDIKLKSMRTITFDGDDDAGAAALAGHDDDDNEAGDDDDD
EESGMEDELVRLCCENPLIRPLYNYCNNLRDQSFRAATDVYVFMFLTDLITFLIAVFGFS
SFGPNDASANNDGKVTTVLKSNKVFLKFIFQIFLVVLIHAWIFIGLPEVTQRRFVNNVAA
QIWYFVKCVYFVLSAYQIRSGYPTCVLGNFLTKKYNYFNLFSFQAFLAIPYLLELRALMD
WMFTDTTLSLSSWLQMEDIYANVFCVKCNRSAEKRYKTPRGNKRAALVKYGLGGIILVAL
VIIIWFPLLLFSMSNAIFLTSQPSEVYVDIKIAGYEELFKMTSQAVDPFTSADYDYFYMK
NSFFMTQYQTSDICNVTIKGESGSVWSITPPALNDLVKQLERKDKVNFIFSMQVRRDPKI
GGEITYGQFKRALDRNNTEDAMIRDGLINLIRRTSNESVTLMNVFPRLILVPAKGVISSV
ERSFVKLGPNDTDTEQTGSLKLTLHSPSNFTYWWSIQQYFNTSDDEFFMEDPTARANKNR
ATPRPIISTTIRPLMRTIPRTRQKNVSAAPTHPHPATDYGGMPSVVDTSYSVSKDKLQLT
MFNERVAPSGVLSIINNYGHAARFNTTKLRYNPHLTLPCTRHRVIGLYVSLVLVIGRFLR
MYIQGLSFKIMFVELPDPQVLLTLCQDIYMVRESKEFRLEEELFSQLIFLYRSPETLIKL
AYSLAQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcgacgtatctacttgtacatcaaacgaacctaccacgaactcgccaacctg
ctctggcgaatcttggaggttcatatgtcaaagatcatcgtcatcttcatcatcgtcgtc
tgcacttatgatgtatgtgccttaaacgtcctcttgctgttggttgctctcatactgtat
cctctaaatttccatcacactctctccatcctgacgatgttctactcttccttcatcatc
atcacccgcatggtctatcagttgagtatattcgaagagaaaacatttacaaccgaatgt
ctgttcaagcaggctgagtatgacgtcatagcctacaatggcacggtcagcgctgttgcc
tatttcggctacaggaaaaccaacaacatctttttcgaggtcaagttgtacgtctgcctg
gtcatcctgctggccttagagatggtcatctccacgcgacagaagcagcactacaaccac
ccgcgacacttgcgaccatacaagggagtcatcttctacggggtcaacaggggcaacgct
gacgtcactgttacctcgtggctcaagttttttgccaattatggattttataagtttgga
aaagagatctgtttcatcttcgtggtcatcgtcatgacgacacgcttggacgccttcagt
ttggtccacggcctcctacttgggtgcctcatcttcctacgcaggtgggcctgccgccgg
gtgtggcccgtctacatcttcctcctcatcatcgccgtcttcgtccagtacctctcgtgc
ctcggactacccaagtccctctgcatcgattacccgtggaacttgaatggttacagcaaa
gttttcacgagaaacctcaaggtcttcctcttccttcccgattacgtgctacctccgtat
gctctcaaaatcattggttgctcctacctggattacgtgaaggtgggagtcttttactat
tccttctggctgaccctattgatcctgttcatagccggaacattccgtgtcaacctgctt
tgtttggggtacttgcttgggtgtttcttcttcctctggcacggtcagagtctcttgctg
aagccgctgaagcacattaagaaaatggctaatcatgttgttctatattttctttgctat
catggtcaagtgtgctttgcaggatcgagaccacagtttgatagggagaagctgggattc
gcgtgggatgccatgggattcgcgatggtcctgctccttctcagaatacacaagtcctgg
ttcttccaacatgttgttaatgaacttcacgttgatagtgttctggcttccagaggcagc
gaactgatagtagaaatgactcaacggaggatagagacgcagagaaagtatgagatgagc
atactggacaagatcagactgaaggtcgaacgcatcagagagaacctgctgaaaaagcaa
gaggcaactaatcagcccatcgttcaatatgctgatcattatcaagttattaggtcaggt
gactactacatgttcgagcaccttgacctagattcgaacagtagtgaggtcaaggacgaa
gacatcctgtccactgaggcccagaaaaaaatggccaagacccctacagtggctgagctc
ttcaacatagtatcgatcgccaacatggagacggccataaagttctggagtgattggatg
agagaaaacaggccgaagaatgacggagagaagaaggaaggaaaaaagagagatgttgag
gaggaaggaagagagggtgatggtcatggggtggaagaagaggatttgcaagaagggaca
tctgatgggactgttatagttaggccacaccataagccagtagtaccagagaacgagaac
cttcttgcaatcatcaaggatgttaccggcgctaagaacctcgtgccctctgacgtcgac
ccacccgtcaaacagaaacgatccgtagctcagacgatccggataagtttctacttcggc
tacatcgtcacttgggctggcgctgagcagctcatcgtcttcctcaacagtctggcccag
gattacatctccatctcggatatcctctttgaagagaaacagaagattaaaaaggcaacg
attctctaccgttcaaacttgctctcggaggacagtttccacgaggaaccagctgactgg
gcaagccaccaccaccaccgccagtacactgaccaccaacatccacattcgcctgatgcg
gccagtcccatcgacgacgacaaggcagtccttacgaccaccaccccatcaacaacagca
gaccagccacctcagcagttgtccttcaaatacaagctcaaaactttcgatcctttcact
gagatcaagaagatcgcccacctgttgcaatcatcttcggcgcaggatctcgcctcgtcg
cagcaggaccagccacagacgccaacgtcccagccgcctagtcttccccctcatcaccat
catcaccttgctctaccgctggttatattcaattcctgttacaccgtttttctgagcaac
tctgaacttctgtgttacttcgccatggtgttgaatgcaattgtctacggcagcatcctg
tccgtggtctatccggtcacggccattctctgggccatgatgacctgccctcgacccagt
aaacgattctggctctttgctattggatacacggagatatgcataatcgtcaagtatgtc
tacaaattcgtcagtccctacactgaccaaccggacgttgtgaacaaggacactttattt
caatggccctacatgctcgggctcgccaacatgacgcacttcgatatcttccttcttttc
tgtctcttcttccatcgttccgttcttatgatgcaaccgaagcaaaaactggaggatcct
gaagatgagatggcagttttggcagctcccaaaccatcgagacctgcaccatcgccatca
tcggcagaacaggaggcatcatccccatcatcactgccccccttaacgggtcaaccttcc
actctgaggaaacgaaatgttaaaaagtttaaaaataaaaacgagaaaggaaaaattgat
gatggcgtggatggtagagatgctgaagtcgtggacggtgatgcgagggagaagaagtca
gatgacatcaagttgaaatcaatgaggacgataacattcgatggtgacgacgacgctggt
gccgctgctctggctggtcatgatgatgatgataacgaggctggtgatgatgacgatgac
gaagaaagcggcatggaggatgaactcgtccgattgtgttgcgagaaccccctaatacgc
cccctgtacaactactgcaacaacctccgcgatcagtctttcagagcggccaccgacgtt
tacgtctttatgttcctcaccgacctcatcaccttcctcatcgccgtctttggcttctca
tccttcggtcctaatgatgcatcggctaacaacgacgggaaagtgaccactgtgctcaaa
agtaacaaggtgttcctgaaattcatcttccaaatatttctcgttgttctgatacatgcc
tggatcttcattggtctacccgaagtcacgcaaagacgttttgtgaacaacgtggcggca
cagatttggtactttgtgaagtgtgtgtactttgtactatcagcctatcagataagatct
ggctaccccacgtgcgtgcttggaaatttcctcactaagaagtacaactatttcaatctc
ttcagcttccaggctttcctagccatcccatacctactggaattgagagccttgatggat
tggatgttcaccgacaccaccctctcactgtcaagctggttgcagatggaggacatttac
gccaatgtcttctgcgtcaagtgtaataggagtgccgagaagcgttacaaaacgcctcga
ggtaacaagagggccgccctggtaaaatacggattgggggggatcattttagtggccctg
gtcatcatcatctggttccctctcctccttttcagtatgtccaatgccatcttccttaca
agtcagccgtctgaagtttatgtcgatatcaaaattgccggctatgaggagttattcaag
atgacgtcacaagccgtcgaccccttcacgtccgctgattatgattacttctatatgaaa
aattcatttttcatgacccagtaccagacgtcggacatctgcaacgtgacaatcaagggg
gagtcaggttcggtgtggtctatcaccccgcccgccctcaacgacctcgtcaaacaactc
gagaggaaggacaaggtcaacttcattttcagcatgcaagttcgcagggacccgaaaata
ggaggcgagataacgtacggccagttcaagagagcacttgaccggaacaacacggaagac
gccatgatcagagatggccttatcaacctcatacggagaacatctaatgaatccgtgaca
ctgatgaacgtctttccccgcctgatcctagtacccgccaaaggagtaatcagcagtgtc
gagaggagtttcgtcaaactgggacccaatgacacagacacagagcagacgggcagtctg
aaactgaccctgcactcaccgagtaacttcacgtactggtggtccatacagcagtacttc
aacaccagcgatgacgagttcttcatggaggaccccaccgcaagggccaacaaaaatagg
gccactcccaggcccatcatctccacaacaatccgtcccctcatgagaacgatccctcga
acccgtcagaagaacgtctcggccgcacccacccacccgcacccagcgacggactacgga
ggcatgccgtcagttgtggacaccagctactccgtgtccaaggacaaactccagctgacc
atgttcaacgagagagttgctccctctggcgttctctctatcattaataattacggccac
gccgcacggttcaacactacaaagctacgatacaatccccacctgacactgccctgcaca
cgacacagagtgataggtctgtacgtatctcttgtgctcgtcatcggccgcttcctccga
atgtacatccaaggacttagcttcaagatcatgtttgttgaactgcccgacccgcaagtg
cttctgacactctgtcaggatatctacatggtcagggagtccaaggagttcagactggag
gaggagctcttctcgcaacttatattcctctataggtctcctgagactcttattaaactc
gcatattcattggctcaataa
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integrated database retrieval system
