Helobdella robusta: HELRODRAFT_190918
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Entry
HELRODRAFT_190918 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
hro
Helobdella robusta
Pathway
hro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HELRODRAFT_190918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_190918
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HELRODRAFT_190918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
20211748
NCBI-ProteinID:
XP_009013947
JGI:
Helro1_190918
UniProt:
T1FSF1
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MMAAMEVDDATDIKLDSLQEEYGFINYYKSLPEKLASTVRFFDRSDYWTVHGSDALFVAN
EIFKTITAIKYLSSGNKTLEYVVVKRGNFESVIRDLLLVKQYRIEVYKSKSLKTQEWVLS
YKASPGNLSQFEDLLFGGSSDESARCGLISIKSSKIADQNVVGIAFCDVAACKFVVCQLV
DDDRHGNVESVVVQLRPRECLLCEGFAGSVGGAGDESLQAVLQRNGVTVTERKKSDFESS
GIALDMNRLLKFPKSSQNPTFATYSEANLTVALSSLSASIKYLDLLSDASYFNQFHISTF
QFGNFVKLDGAASRALNLLPSPQDGPGSHRSMFTLLNRCRTHVGQKLLSSWIHQPLVDPN
QIDDRLDILQRLIDNSELRACLHDDLLRRTPDLQMAARKLQSKKAGLMECYKIYKVVEVL
PKFVEVLGRCEEEDEDGGMVNKRCAKWRELFVDPMKELISDFGKFKEMVETTLDLEKVDD
NEFLVKSDFDESLQSLSEQMLEVEGKMTKEFNKAARDLGLETNKTIKLEATTQLGYFFRI
TRKEEKCLRGNERSYHTLDTNKGGVRFRSVPLETLNDRYLSLKEEFVEQQKGVVVEIVSV
ACGYVEPLSSLIELIAQIDVFVSLAVASLDGPSPYVRPNIIREGVRKLKLLGVRHPCLER
QDGVAFIPNDVIMSSDDKTFHIVTGPNMGGKSTYIRSAAMVVLMAQMGCFVPCDLCEMTL
VDGVATRVGAGDNQLKGVSTFMAEMLETANILKSATKNSLVIVDELGRGTSTYDGFGLAW
SIAKHIAAELECFCLFATHFHELTSLADELSCVTNLHVTAVTSEDKLTLLYKVEKGVCDQ
SFGIHVAEIVQFPKHVVENARKLASEMEQAATSFVGSNKSNDGMELNENGDDEEKFLSKV
TLEEAKNFLSKAKELSADCTDDVTLWNKIQDLKKSMVENCCQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccatggaagttgatgatgccacggatattaaactagattcccttcaagaa
gagtatggcttcatcaactattataagtccttaccagagaaattggcttcaactgttcga
ttttttgacagaagtgattactggacggttcatggcagtgatgcattgtttgtggccaat
gaaatcttcaagaccatcacagctatcaaatatttatcatcaggcaacaagactttagag
tatgttgtagtgaagagaggaaatttcgaatcagtgattagggacctgctactcgtcaag
cagtacagaattgaggtttacaagtcaaaaagtttgaaaactcaagagtgggttctatct
tacaaggcctcaccaggcaatttgagtcaatttgaggatctgttgtttggtggctcgagt
gacgagtcagccagatgtggtctcatatcaatcaaatcaagcaagattgccgatcagaat
gtggtggggattgcattttgcgacgtggcagcctgtaaatttgtagtctgccagctggtt
gatgacgaccgacacggtaatgtcgagtcagtcgttgtacagttgaggccaagggagtgt
cttctgtgtgaaggctttgctggttctgttggcggggcaggtgatgaaagtttgcaggct
gttctgcaaaggaatggcgtaactgttactgagaggaagaaaagtgattttgagagtagt
ggcattgcacttgacatgaatagacttttaaagttccctaaatcatctcaaaacccaact
ttcgccacatactctgaggccaacttgacggtggcattgtcgtctcttagtgcttcgata
aaatatcttgatttactatcagacgcaagttacttcaatcagttccacatctcgacattt
cagtttggaaattttgtaaagttggatggtgctgctagcagagccttaaatctcttaccc
tctccacaagatggcccaggttctcatagaagcatgttcactttgctgaacagatgcaga
actcacgttggccaaaaactcctgtcaagctggatccatcaacccctcgttgatcccaat
caaattgacgatcgtctagacatactgcaacgtctgatagacaattcagagttgagagcc
tgtctacatgatgacctcctcagacgtactccagacttacaaatggctgcccgaaaactt
caatccaagaaggctggtctcatggaatgctacaaaatatacaaggtggtcgaagttttg
cctaaatttgttgaagttttaggaagatgtgaagaagaggatgaagatggtggaatggta
aataagagatgtgctaagtggagagagttatttgtggatcctatgaaggagttgattagt
gacttcggcaaattcaaagaaatggttgaaacgacattggacctcgagaaagttgacgac
aacgagttccttgtcaaatcagattttgatgaatcgcttcaaagtctgagtgagcaaatg
ctagaagttgaaggcaagatgacaaaagaattcaataaggccgcccgcgatttaggtctt
gagacaaacaagacgataaagctggaggccactacgcagctgggatacttttttagaatc
acaaggaaggaagagaagtgtctgcgcggcaacgaacgctcctaccacactctcgacacg
aacaagggtggcgtgcgatttcgaagcgtgcctcttgaaaccctcaatgatagatatctg
tccctgaaggaagagtttgttgagcagcagaaaggtgtcgttgtcgaaattgtctctgtt
gcttgtggatacgttgaaccactatccagcttgatagaattgatagcccaaatagatgtt
ttcgtctcattggctgttgcctctttagatggcccctccccctacgttaggcccaatata
attagagaaggagttagaaaattgaaacttcttggagttcgacatccatgccttgaaaga
caggatggcgttgctttcattcctaatgacgtcatcatgtcttccgacgacaaaaccttt
cacattgtcactgggccaaacatgggaggaaaatcaacgtacatcagatcggcagctatg
gttgttctaatggcccaaatggggtgctttgtgccgtgtgacctttgtgaaatgaccttg
gtggatggggttgcgactcgagttggagccggggacaaccaattaaaaggagtctcgaca
ttcatggctgagatgctagagactgcaaacattcttaagtcagccacgaagaattcttta
gtcatagtggatgagttgggcagaggaacatcaacgtacgatgggttcggtcttgcgtgg
tctatagcaaaacacatagcagcagagttggaatgcttctgcctgttcgctactcacttc
cacgaactgacctcattggcagacgaacttagctgcgttactaacttacacgtcaccgcc
gtaacctcagaggataaattaactttgttgtacaaagttgaaaagggtgtatgtgatcag
agctttggtatccatgtcgcagagatagtccaatttccaaagcatgtggttgagaatgcc
agaaagctggccagtgagatggaacaggcagctacgtcgttcgttggatccaacaaatcc
aacgatggtatggagttgaatgaaaatggcgatgatgaagaaaaatttttatctaaggtg
actttggaagaagcaaaaaattttttatcgaaagccaaggaattatcagcggactgtaca
gatgatgttactctctggaataaaatacaggacttgaaaaaatctatggtggagaactgc
tgtcagtga
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integrated database retrieval system
