Helobdella robusta: HELRODRAFT_190923
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Entry
HELRODRAFT_190923 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
hro
Helobdella robusta
Pathway
hro04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
HELRODRAFT_190923
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hro01002
]
HELRODRAFT_190923
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_190923
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_190923
Enzymes [BR:
hro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
HELRODRAFT_190923
Peptidases and inhibitors [BR:
hro01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
HELRODRAFT_190923
Membrane trafficking [BR:
hro04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
HELRODRAFT_190923
Ubiquitin system [BR:
hro04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
HELRODRAFT_190923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
20211749
NCBI-ProteinID:
XP_009013957
JGI:
Helro1_190923
UniProt:
T1FSF2
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MVQPHNVALFCGIASIFSATLYYLLKKPESLKLGKDKKSPCPGLMNLGNTCFLNSILQAL
SPCKLFVDWLEFILDHSTYMNKNSLVFEVYATLKILNNESIEHTEDYNPKPVLNKLASKG
WVISNGEHDASELFHVLMESLNEELIVNPSTISLFDISTLEKFRCLLPDEAVNNISTSLP
KLNSSSPLPSSSSSSSPSFSSSSSLPPFFGRLASQLICKYCGSRNPMSYQTFCCLSLPLP
PNKYGLTTLELLLKNYLQSENIDEAMCEKCKVKRPFIKRTTIGKLPHSLCIHLQRTTWSS
VGAYKRMDQVTIPDHIDLGQYLWRGTCGFSGAGGIISEAVGLGGLSLLGPKIRDVQKVGL
LGGKLKEEKMDEESVAVVGGDSGDGDGDKLMKRMDLLASSVDSQKMLKRRKMKNKICLTN
PYSISVNMLKALNYYSHLSSLGLQNASVKMSPATNTTSSSSSSSLSIDTSSSSSSSTNIS
SSSSSSSSSTPSRSSAEFDLANRKTILSPTRTTTEIPKELTMLADAYESEYLCCRKMPKN
GGNSSTIYRLSSVIVHYGDVSSGHFVAYRRSPTRFGVRFPDRHVCERVFYGGSLFISPIH
ADVREVVIGPHLKISGMDE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaccacacaatgttgccctgttctgtggaatagcttccattttcagtgccacc
ctgtattatttgttaaagaagccagaatccctgaaattagggaaagacaaaaaatcgccg
tgtccgggactcatgaatttaggaaacacctgctttttgaactccatcttgcaggcactc
tctccatgcaaattgtttgtggactggctggagttcatccttgatcattctacatacatg
aataaaaattctttggtgtttgaggtttatgccacgttgaaaatcttaaacaacgaaagc
attgagcatacagaagactacaaccctaaacccgtattgaataaactggccagtaaggga
tgggtcatttctaatggcgaacatgatgccagtgaattgttccacgttcttatggaaagt
ttaaacgaggaactcatcgttaatccttctactatttctctgtttgatatatcaacatta
gagaaatttaggtgcttgttgccagatgaggcagtgaacaatattagcacaagtctgcca
aaattaaattcatcatcaccattaccgtcctcatcatcgtcatcatcaccgtcattttca
tcatcgtcgtcgttaccgccatttttcggccgtcttgccagtcagcttatctgcaaatac
tgcggatctaggaacccaatgagttatcagactttctgctgtctttccttgcctctgcct
cctaataaatatggattgacgacgttggagttgttgctaaagaattatttgcagtctgag
aatattgacgaagccatgtgtgagaagtgcaaagttaagaggccattcattaaaagaact
acaattgggaagcttccgcattcactgtgcatccacttgcaacgtacaacgtggtcatcc
gttggggcctacaaaagaatggatcaagtaactatccctgatcacatcgacctgggccaa
tatttatggagaggtacttgtggtttttcaggtgccggcggtatcattagtgaagccgtt
ggtcttggggggctgtccttactgggacctaaaatcagggatgtgcaaaaggttgggctg
ctgggtgggaagttgaaagaggaaaaaatggatgaagaatcagtcgctgttgtcggtggt
gactctggagacggagatggagataagttgatgaagaggatggatctgctggcctcatct
gttgatagtcaaaaaatgttgaaaaggagaaaaatgaaaaataaaatttgcctcacaaat
ccttactctatatctgtaaacatgctgaaagcactgaattactactcacatctatctagt
ctcggacttcagaatgcatcggtcaaaatgtcgcctgctactaatactacttcgtcttct
tcatcgtcatcgctatccattgatacgtcatcgtcatcatcttcttctactaacatttca
tcgtcatcatcttcttcttcatcgtcaacgccgtctagatcatcagcagagtttgatttg
gccaataggaaaactatcttatcccccactagaacgacgacagagatcccaaaagaactg
accatgctagccgatgcttacgaaagcgaatatttgtgttgcagaaaaatgccaaaaaat
ggcggaaactcaagcaccatctaccgcttatcatctgtcatcgttcattacggagacgtg
tcgtctggtcatttcgtagcctaccgaagatcgcctaccagatttggggttcgatttcct
gacagacatgtatgtgagagagtgttctacggaggaagtcttttcatcagccccatacat
gctgatgtacgagaggttgtgatcgggccccatttgaaaattagtggaatggatgagtga
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integrated database retrieval system
