Helobdella robusta: HELRODRAFT_190982
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Entry
HELRODRAFT_190982 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K06052
jagged-1
Organism
hro
Helobdella robusta
Pathway
hro04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
HELRODRAFT_190982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hro04090
]
HELRODRAFT_190982
CD molecules [BR:
hro04090
]
Proteins
HELRODRAFT_190982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
DSL
EGF_2
EGF_DL_JAG
JAG1
PFF1_TM
EGF_CA
EGF_Teneurin
JAG1-like_EGF2
EGF_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
20211767
NCBI-ProteinID:
XP_009014186
JGI:
Helro1_190982
UniProt:
T1FSH0
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MAMHFKSISFWHSKETCEFYVGTDADSYLIERAHYSGVILPRSEWQTMSFAGHTAILKYK
IRVQCDLHHFNVTCTKFCRPRNDTFGHYTCDSNGDKVCLNGWIGTNCETDKSSNDMMMRE
GKRLEMKMFIVKLQKGTLKTTNVKILKIEDEHFTSGCYRLILPPPSFTLIILFLVFFRGI
NNEQTLNGWEGELCGQCSKHPGCKHGTCRTSPWECHCEPNWGGPLCDKDLNYCGRHSPCL
NGGLCINKAPDDYQCQCLNAFEGRNCEIARYQACSKRPCQNGGSCVLKGVQLLCQCTEGW
AGEMCQINVDECSSNPCQHGGTCIDGVAGYQCICPSQWQGGRCEHDADECIKFPCLNARS
CQNIVGDYLCHCIEGWTGRNCDISLYGCKKGCHNNGKCMKAVVGYSCVCKEGFTGSQCES
AISKCSSQPCQNSGTCRDGPAGAYRCMCPEGYSGPNCELQRDPCEPNPCQNYSPCHRQGS
SYLCECSDCYTGPTCSVKKENCGHSNHKDICAYPTSSSSCGKHGNCIRSSAGVQKCVCDA
GFTGLHCHENINDCANNPCMNMGTCVDGVNNFQCICSDGWEGHLCNIDQNDCSPNPCRNG
GTCIDMLAGFKCLCREGWKGRTCSSKVSHCDSQTCLMGGTCVELHDTFKCLCPNNLHGDI
CQSVINTSCRTNPCQNGATCVNTGDTFTCLCVEGFTGTSCEINVNDCNPYPCYNNGQCVD
GVNWYQCRCLDGFTGHDCKTVVGNLSLASKSCLFQSSMYAHNFRWTSDCNSCVCYDGLVQ
CTNIWCGPSSCHLNHPTSPHSNSSSQLACGPDEICVVQSESRCFTPPCSLIGECRHMINI
GQSKIISSSDENIINMKCRPNLLVTSRACVRMMLTFDRKHAPQGVTVDDVCRIIRNISAL
NGMTTGETLVILCDVQLDDADTIESLLEPHNLSEDDVMKYSHQMANDIEEVIKRKESNWT
LFSSVVRVRLEDFTTNEGNSLDLPVYLIPLVTAIIVLAGIIAIILLVFWHRKFVRRCRQK
KEQTDALMKLDAPPNNDCQLNKLNNLNNNNNNNNNNNINNNNNNNNNNNNNNSYKSCSNS
QRELQPLNRHHNQIHSNADNDDAIRNNKVNWDKALKSKKNVDKKQNNLPSAGPCDMKMET
YDDSPAQRPHKIKQINVKLNKDNVIKNINTSSSSSSSKSSSSSSMHENNTAALEFKPSNN
KKFNCERDSYAEDCSEDTKLKNRILLSDPNKDINTDVKFSPNYDVIL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcatttcaaatctatttctttttggcattctaaagagacatgcgagttttat
gtcggcactgatgctgatagctacttaatagaaagagctcactactcgggggtgatactt
ccacgatccgaatggcagacgatgtctttcgctggccacaccgccattctcaaatacaag
attcgcgtgcaatgtgatttacaccatttcaacgtcacctgcacaaagttttgccgccca
agaaatgacactttcggtcattacacttgtgacagcaacggcgacaaagtttgtttgaac
ggctggataggcaccaactgcgaaacagataaaagttcaaatgatatgatgatgcgtgaa
ggcaagaggctggaaatgaaaatgttcattgttaaactgcaaaaaggaacgttgaagacc
accaacgtgaaaattttaaaaattgaagatgagcattttaccagtggatgttatcgactt
atacttcctcccccctcctttacattgatcattctctttttagtattttttagaggcatc
aacaacgaacaaacattgaacggttgggagggggagttatgtgggcaatgcagcaagcat
ccgggctgcaagcatggaacgtgcaggacctcaccttgggagtgccactgcgaaccgaac
tggggcggaccactttgcgacaaagatttgaactactgcggacgtcattcgccctgtttg
aatggaggattgtgcataaacaaagcccccgatgactatcagtgccagtgtcttaatgca
tttgaaggcagaaattgtgaaatagcaaggtaccaggcctgttccaaacggccctgtcaa
aacggagggagttgcgttctcaagggggtccagttactctgtcaatgtactgaagggtgg
gctggagaaatgtgccaaataaacgtagatgagtgttcctccaacccctgtcaacacgga
ggtacctgcatagatggggtggcagggtaccagtgcatctgtccctcgcaatggcagggt
ggtcggtgtgaacatgatgctgacgagtgcattaaatttccatgtctcaatgccagatct
tgccaaaatattgttggagactacctctgccactgtatcgagggatggaccggcaggaat
tgtgacatcagtttgtacggttgcaagaaaggctgtcacaacaatgggaaatgcatgaaa
gctgtcgtcgggtatagttgcgtctgcaaagaaggcttcacaggcagtcagtgtgagagt
gcaatctcgaaatgttctagtcagccatgtcagaactcaggcacgtgcagggatggtcca
gcgggagcgtacaggtgcatgtgccccgaaggatattccggacccaactgcgagcttcag
agagacccgtgcgagcccaacccgtgccagaactactccccatgtcacagacagggcagc
tcctatttgtgtgaatgttctgattgttacactggtcccacctgttccgtcaagaaagaa
aactgcggccactcaaaccataaagatatttgtgcgtatccaacatcgtcgtcgtcatgc
ggcaaacacggaaattgtataagatcaagtgctggagttcagaaatgcgtctgcgatgct
ggctttactggtctccattgtcatgaaaacataaatgattgtgccaacaatccgtgcatg
aacatgggaacgtgtgtggacggcgtcaacaacttccagtgcatctgcagcgacgggtgg
gaaggacacctctgcaatattgaccaaaatgattgctcaccgaatccatgtcgcaacggg
ggcacctgcatcgacatgctggccggcttcaaatgcctgtgcagagagggctggaaaggg
agaacctgctcttcaaaggtgagccactgtgacagccagacctgtctgatggggggtaca
tgtgtggagctgcatgatactttcaagtgcttgtgtcctaataatctgcacggcgacatc
tgccaatcagttataaacacgagctgtcgtacgaacccgtgccaaaatggtgcaacgtgc
gtgaacacgggggacacgttcacctgtctgtgcgtcgaaggtttcacaggaacttcttgc
gagatcaacgtcaacgactgcaatccttacccctgttacaacaacggacagtgcgtggat
ggcgttaattggtaccagtgcagatgcctcgatggcttcacaggacatgactgtaaaacc
gtggtaggaaatttgagcctagcgagcaagtcctgtctgttccagagcagtatgtacgcc
cacaacttccgctggacctccgactgcaactcctgcgtctgttacgatggcctcgttcaa
tgcacaaatatatggtgtggaccgagctcgtgtcatttgaaccacccaacatctccccac
tccaactcttcctcccaacttgcttgtggtcccgatgaaatatgcgtcgtccaatcagaa
tccaggtgcttcacaccaccctgctccctgattggcgagtgtcgtcacatgataaacatc
ggccaatcaaaaatcatttcatcttcagacgagaacatcataaacatgaagtgcagaccc
aacctgctggtgacgtcacgagcttgcgtcaggatgatgctcaccttcgacaggaagcac
gctccacagggagtaacggtggatgatgtgtgtcggatcattcgcaacatatcagctctg
aatgggatgacgaccggggaaacgctagtcattttatgtgacgttcaactggacgacgct
gacaccattgaatcacttttagagccacacaacctgtcggaagatgacgtgatgaaatac
tcccaccaaatggcgaatgatattgaagaggtcatcaaaagaaaggaatcaaattggacc
ttgttttcgtcagttgtgagggtcagactggaagatttcaccactaacgaaggaaacagt
ttggatttgccagtctacctcatacctctcgtcacagccatcatcgtcctcgctggcatc
atcgccatcatcctcctcgtcttctggcacagaaagttcgtgaggagatgtcgacagaag
aaggagcagacggatgccctgatgaagttggacgcaccacccaacaatgattgccagttg
aataagctcaacaacctcaacaacaacaataataataacaacaacaacaacattaataat
aacaacaacaataataataacaacaacaataacaacagttacaaaagttgttccaactcc
caacgagagctacagccactgaatcgacatcacaaccaaatccacagcaacgccgacaac
gacgatgccattcggaacaacaaagtcaattgggacaaggccttgaagtcgaagaagaat
gttgacaagaagcagaacaacttgccaagcgccggtccgtgcgacatgaagatggagaca
tacgatgacagtcccgcccaacgaccacataaaattaaacaaatcaacgtaaaactcaac
aaagacaacgtcatcaaaaacattaacacgtcatcgtcatcttcatcctccaaatcgtca
tcgtcatcttcgatgcacgagaataacaccgccgcgttagaatttaagcccagtaacaac
aaaaaattcaactgtgagagagattcctatgctgaagattgcagtgaagatacgaaactg
aagaacaggattttgctgtctgaccccaacaaagatatcaacactgatgtcaagttttct
cccaattacgacgtcatactgtga
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