Helobdella robusta: HELRODRAFT_191379
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Entry
HELRODRAFT_191379 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_191379
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_191379
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HELRODRAFT_191379
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
HELRODRAFT_191379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YqgF
HTH_44
Tex_central_region
SPT6_acidic
Tex_N
Motif
Other DBs
NCBI-GeneID:
20211926
NCBI-ProteinID:
XP_009016403
JGI:
Helro1_191379
UniProt:
T1FSX9
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MEFLDDKAVVSSDEEMSDVDNADELDSPRKKKSSRKPKADTFEEDDDDDDDDEEEDDNQV
VEGLIDDNPIDESDGEESVIGALKRKHESESEDDDNLDDDDYDLIEENLGTTIKRKHQRR
RIENDEDEDDEEEINHGDKKKELEERLFDADGGGVEGSPVRRDVADDAVIAESDDEYEDE
DDGFIVYDDEQQQRDVKKRRTHDDAAIQEAYDVFGAEFDFTDLDHAEDDEEEEEDADYEA
EDGDEPEIRPTKSTKKKKASLKQIYEPGELERAHLTDYDQEIRTMDMPERFQLRSIAVCP
TEEGELDEEAEWINKNAFNTPPLSKQDYYDVDVGYSGMHRKGPSTVNKIREALNLMRNQK
FEVPFIAFYRKEYIDPELNITDLWKVFHWDEKWMQLKERKQNLLHLFEQLQQFQFEEASL
DKPLDASFRRLTEDDIERVKAVQTMEQLNDIHQHFNLYYANDVTRMKMAKKIKRKLAEDG
GEDGSAAHDEEASVLKQAPKRSAYNICVDAGLCEMARRFGLTPEQFGENINDNYMRHEVE
QDPGDPNELAEEFIKGQFCSRDHVLAGSRHIVSMQIAYDPLVRSCVRQVFQERCKMNVRP
TSKGFSEIDESHQCYSFKYLRSKPIRDLQEDQYLKIHQAEEDGLLKVDFFLDDKDNVRYT
YYEEIKQLFIRDEYSHVVQEWNKQRTLAVERALNVILYPILIKQVKMKLLEEAKEHVMRV
CCRKLYSCLKVAPYQVDQPLDEEDEDYDTSNGLRIMGVSFSDDKSEASYCAIIDGSGEVT
DYLKLPYLATRRNSWIKDERVAKEKELVRLKDLILSKKPHVIAVGAESRDVLTVIDDLKN
IVSELEQEQQIAPISIELIDNELARVYAASKKADRLVSMLIVVRSFKSDQEGSISQMVLN
TVQSFFSLQIFWHIYNTFTGSAINKYALTYILTCEQRKLKV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttggacgacaaggctgttgtttcgtctgacgaagaaatgtcagatgttgat
aatgctgatgagcttgatagtcctcgtaagaaaaagtcatctcgcaaaccaaaggcagat
acttttgaggaagatgacgacgacgacgatgatgatgaggaagaagatgacaaccaggtt
gttgaggggctgatcgatgacaaccccatcgatgaatctgacggagaagagagtgtcatc
ggggcgttgaagaggaagcacgagagtgaatcagaagatgacgacaatctcgatgacgat
gattatgatctcatcgaagaaaatttgggcacaactattaaaaggaaacaccagaggagg
agaattgagaacgatgaggacgaagacgacgaagaggaaataaatcatggtgataagaaa
aaggaactggaggagaggttgtttgatgctgatgggggaggggtggaaggttcacctgtc
aggcgtgatgttgctgatgatgctgtcattgctgaatccgatgacgaatatgaggatgaa
gatgatggctttatcgtgtatgatgatgaacagcagcagagagatgtgaagaagaggagg
actcacgatgatgcagccatccaggaagcctatgatgtgtttggtgccgagtttgacttt
acagaccttgaccatgcagaggatgatgaagaagaggaagaagatgcagattatgaagcc
gaagacggtgatgaaccagaaattaggccaactaagtcaaccaaaaaaaagaaggcttct
ttgaaacagatttatgagccaggcgaacttgaacgagcccacctgacagattatgaccag
gaaataagaacgatggatatgcctgaaaggttccagctgaggagcattgcagtgtgtccg
acagaggagggagagttggacgaggaggctgaatggatcaacaagaacgcattcaacaca
ccaccactctcaaagcaggattattacgacgtagacgttggttattcgggcatgcatcgc
aaggggccatccactgtcaacaagataagagaggctctcaatctaatgcgcaaccaaaag
ttcgaggtgccattcatagccttctacagaaaggaatatatagacccggagttgaacatc
acagatctatggaaggtctttcattgggatgaaaagtggatgcaactgaaggagaggaag
cagaatctgttgcacttgtttgaacagttgcaacaattccagttcgaagaagcatctttg
gacaagccactggatgcttccttcaggagattgacagaggacgacattgagagagtgaag
gcagtccagaccatggaacagttgaatgacatccaccagcacttcaatctttattatgca
aatgatgtaactaggatgaaaatggcgaaaaagattaagagaaagcttgcagaagatgga
ggtgaagatggaagtgcagctcatgacgaagaagccagtgttttgaaacaagctcctaag
agatcggcctacaatatctgtgtcgatgcaggactatgtgagatggctcgaagatttggt
ttaacgccagagcagtttggtgaaaatatcaacgataactacatgagacacgaagtggag
caagatccaggtgacccaaatgagcttgctgaagagtttattaaagggcagttctgctct
agagatcacgtcttggcagggtcccgccatatagtctccatgcagattgcttacgacccg
ctggtcaggtcttgcgtcaggcaggtgtttcaggagaggtgcaagatgaacgtcagaccc
accagcaaaggattttctgagatagatgagagccaccagtgctacagcttcaaatacctt
cgctctaaacctataagagatctccaggaggatcagtacttgaagattcatcaggcagaa
gaagatggattgctgaaagttgatttttttctcgatgataaggataatgtgcgatatacg
tactatgaagaaataaaacagctcttcataagggatgagtacagtcacgttgttcaagag
tggaacaagcagcgaaccctggcagtcgagagggcactgaatgtcatcctctacccaatc
ctcatcaagcaagtcaagatgaagttgttggaagaggcaaaggagcacgtgatgagggtg
tgctgtcgcaagttgtactcctgcttgaaggtcgctccctaccaagtcgaccagcccttg
gacgaggaggatgaggattatgatacatctaacggcctgcggatcatgggggtctccttt
tctgatgacaaaagcgaggcatcttactgcgccataattgatggcagtggcgaagttact
gattacttgaagctgccttaccttgcaacacgcagaaacagttggatcaaggatgagagg
gttgcaaaggaaaaagaactggttcgcttgaaagatttgattttatctaagaagcctcac
gtgatagcagttggtgccgagtcgagagatgtcctcaccgtcatcgatgatttgaagaac
atcgtgtcagagttggagcaggaacaacaaattgctcccatcagcatcgagttgattgat
aacgagcttgcaagagtatatgctgcttctaagaaagctgatcgcttggtgtcaatgctg
atagttgtcaggtcatttaaaagtgaccaagagggtagcatcagtcagatggtacttaat
acggttcaatcgttcttctcgcttcaaatcttctggcatatatacaatacgttcactggt
tcagcgattaataaatatgcacttacatacatcctcacatgtgaacaaagaaagttgaaa
gtgtga
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