Helobdella robusta: HELRODRAFT_192000
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Entry
HELRODRAFT_192000 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_192000
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
HELRODRAFT_192000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
TPR_Trm732_C
HEAT_EF3_N
Sporozoite_P67
HEAT_2
mTOR_dom
TOR1L1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
20212126
NCBI-ProteinID:
XP_009018482
JGI:
Helro1_192000
UniProt:
T1FTH9
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MSSRLDRLLLLLDSGSNAAIRKSAAEQLGDVQKLYPNELHNLLNKVHVYLMSSQWETRVA
ASQAVEAIIRNVDQWQPIGLERLDDHNLNGRLSVESSDHLSLSNFDVNKVLAQDVILSMC
DDKEFEEPTGSFEVINSREKLQEQKRQLNKKLGLDVCSMLNMSVDSLFEESDLIVEPKMA
AVAATVTSSVSSSVKDYVENKLVASNNNNNNNSNNNIKSGKRKCESDNYATEKKLKKPSD
EDGDSIKDDDFIAEEEKPQTDWPFAHFAHSLANNLFNASWVKRHGSALGLKVILKVHGSG
AGKSCCLYKDELEKANLVYLEDLSVRLICVLALDRLGDFLSDEVVAPVRETCAQTLSIAC
MHVDKRGALQIVKALLQLLDHKQENGELWEVRHGGLLGIKYILATRKDMTYDLLESCLPS
IHIGLLDGSDDVRSVAASALLPVVDELIRSSPDQALKIIDSLWLSLKELDDLTSSTNSIM
SLLSQLLSHPLVCHKYQGSTLSVLIPLIYPFLSHNITSVRQASLQTLVTLVKRSLDIKDV
TWISGILQDLMRHIYQRSLLEYDVHLLDLIVEVWRSILACAGNDQLVAAVGFYFNSWMCM
LMQPAGVPYDHQLLLNSSSSSSMPANLNTSVAKQQQQQCNIKFIAEISNIVDSTAERDAL
VTRARLTAANLLGQLCYVLTKPQPELQNDQQQQTDQQHQQQQTDQQQKRQLISNDLCKLF
SIYLSSKSAIQRMLTSHIINFWVVNINYNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTT
ATEDSKSSNATSSANENCNSISTASTTSNCNVGDNNDNNNSNNNNISNNTNNNNNTYSRD
SFDIIPSYLVDQLRILLTELLYYDEIATMITVLQVESRSLLAFIASCGIKLAEPYNDLNA
VLTTEQIQHLCKVEAENCSKSLVSLKASTNQLESLQRKRSNLETSLSQTVSEQNILSNRV
QCSIASVLVHMDRMPSSLNPIMRPIMESIKSEENLQLQELTGSILSEVIELCKTRLPCPN
LKAIKNLCNMATADCKCFLDSNGLEKFDKFSDIMVLWTRQQVQISKTRKLGSLKKSSSSS
SSSTSSAAAASTAAAAVKDDADVNEAAEVAKSGSTNQKRGPVSALCSIVTKAGKNFPHDV
PDLWNIIFAGMEKAVVKKEVRDKDGCGQINNNENSNNNNNNNNNNNNNNSDDNDEDNDSL
ELVKCLHIFNIIIPSVHQDLHEHLFSHFPCLLACLEHRYSAVRNAAARSLATIARVASVI
TIEAVVVRHLLSWLQDPVNDNRKMGAVEAISLIVEELSIGILPYITSLVLALLGVMSYQN
KQVRHVATFTFANLVCLMPLEKPVSQSTNDGDVKTSSSTTTATSSTTASSSSSTTTSSTT
SSSSLTTTSSTTTSSSSSVMTSSTTSSSSVMTSSSSPSSAVVEAKIKQDRTFLEQLLNPK
LIEDYKVPLKLKVQLRRYQQDGINWLSFLARFKLHGILCDDMGLGKTLQALCIVAANHHE
REIRLAKKKVKYESPPSIVICPPTLTAHWLYEAEKTLPDGLIRTLHYIKWNYCILDEGHI
IKNNKTKVSKAIKQLRCSHRLILSGTPIQNNVLELWSLFDFLMPDTKIMGHRNYQIKVTI
KVTIKVVVKTKTQRSLVS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaggttggatagactgctactcttgttagattcggggtcgaatgctgcgata
agaaaatctgcagccgaacaattaggagatgtgcagaagttgtatcccaacgagcttcat
aatttgcttaataaggtccatgtctatctgatgagtagccaatgggagacgagggttgcg
gctagccaggctgttgaagctataattagaaatgttgatcagtggcagccaattggatta
gagagattggatgatcacaatttaaatggaagactcagcgtagaatcttctgaccatttg
agtttatcgaattttgatgtgaacaaagttctagcgcaagatgtcattctgtccatgtgt
gatgataaggagtttgaggaacctactggctcctttgaagttataaacagtcgggagaag
ttgcaggagcaaaagaggcagctgaacaaaaagttgggccttgatgtctgcagcatgttg
aacatgtccgttgacagtctcttcgaggagagtgacctgatagtcgaacccaaaatggcg
gcggtggcggccaccgtgacgtcatcagtttcatcatcagtgaaggattatgttgaaaat
aagctagttgcaagcaacaacaacaacaacaataatagtaataataatataaagtctgga
aaaagaaaatgtgagagtgacaattatgccacagagaagaaattaaaaaagccgagtgat
gaagatggagattccataaaagatgacgattttattgcagaagaagagaaaccacagaca
gattggcctttcgctcactttgctcattctctcgccaataatctttttaatgcatcctgg
gttaaaaggcatggctcggcccttggtctcaaggtcatcctcaaagttcatggctcaggg
gctggcaagtcctgctgtctctataaggatgagttggagaaggcgaacttggtgtatttg
gaggatctgagtgtccgccttatctgcgtgctggctctcgacagattgggcgacttttta
tctgatgaggtggtcgctccagttcgagaaacgtgcgcgcagacactgagcatagcatgc
atgcacgttgacaagcggggcgcactgcagatagtgaaagcattactccagctacttgat
cataagcaagaaaatggcgaattgtgggaggtcagacatggcggactgctggggataaag
tacatccttgctacacggaaggatatgacctatgatcttttagaatcctgcctgccgagc
atacatataggactgctggacggatctgatgacgtcagatccgtcgctgcatccgcatta
cttccggttgtggacgagttaatccggagctcgccggatcaggctctaaagattattgat
agtctttggttgtcgttgaaagagttggacgatctgacgtcatccacgaatagcatcatg
tcgctattgtcgcagcttctctcgcatccgcttgtctgtcataaataccagggttcgaca
ttgagcgtattgataccacttatatacccgttcctgagtcacaacatcacatcagtgagg
caggcctctttgcaaaccttagtgaccttggtcaaaaggtcactcgatattaaggatgtg
acttggatatctggaatattgcaagacctgatgaggcacatataccaacgcagcctgcta
gagtatgacgtacatttgcttgaccttattgtcgaggtgtggcgtagcatattggcctgc
gctggcaacgatcagctggtagcagcggttggcttctacttcaacagctggatgtgcatg
ttgatgcagccagctggcgtgccttacgaccaccagctcttgctaaactcttcttcctca
tcatccatgcctgctaacctgaacactagtgttgcgaaacagcagcagcagcagtgcaac
ataaagttcattgctgagatttcaaacattgtcgactcgacggccgaacgagatgctttg
gtcaccagggctcgtttgactgcagctaacttacttggtcagctctgttacgttctaacc
aaaccacagccagaacttcaaaatgaccaacaacaacaaaccgaccaacaacaccaacaa
caacaaactgaccaacaacaaaaacgacaattaatatccaacgacctatgcaaactgttc
agcatctatctctcgtctaaatcggccatccaacgcatgctcacctcgcatatcatcaac
ttctgggtggtcaacatcaattacaataataacaacaacaataacaataataataacaac
aataataacaataataacaacaataataataataataataacggtactaccacaaccact
gctactgaagattccaaatctagtaacgctactagcagtgctaatgaaaattgtaatagt
atctctactgcttctactacatctaactgtaatgtcggcgataataacgacaataacaac
agcaataacaacaacattagcaacaatactaacaataacaacaatacttatagcagggat
tcattcgatataattcctagctatttagttgatcagctacggatattattaaccgagcta
ttatactacgacgaaatagctacgatgattacagttcttcaggttgaaagccgatcgctc
ttagctttcattgctagctgtggtataaagctggccgagccctataatgatctgaacgcg
gtcttgacgacggaacaaatacagcatttgtgtaaagtggaggcagagaattgctctaag
tcgttggtcagtttgaaggccagcacgaaccagctggaatccttgcagaggaaacgctca
aatttggaaacttccttgagccagacggtgtctgaacagaatatactatctaatagggtt
caatgtagcattgcatctgtattggtccatatggatagaatgcctagctctctcaatccg
ataatgaggcccataatggaatccatcaaatcagaagagaatctgcaacttcaagaactc
accgggtcaatcctctccgaggtcattgaactttgcaaaactaggttaccctgtcccaat
ttgaaggccatcaagaatttatgcaacatggccactgccgattgtaaatgctttcttgac
tccaatggtcttgaaaaatttgacaagttttctgatattatggttctttggactagacag
caggtgcagatttccaaaacgagaaagttgggttctttaaaaaaatcatcttcatcgtcg
tcatcgtctacgtcatcagcagctgcagcatcaacagcagcagcagcagtgaaagatgat
gctgatgttaatgaagctgctgaagtcgcaaaatctgggtcaaccaatcagaagcgagga
cctgtttccgctctgtgtagcatcgtcacaaaggcgggaaagaatttcccgcacgacgtt
cctgatctctggaatatcatctttgctggcatggaaaaagctgtggtcaagaaagaagtg
agggacaaagatggctgtgggcaaatcaacaacaacgaaaatagtaataataataataat
aataataataataataataataataatagcgatgacaatgatgaggataatgattctctc
gagttggtcaaatgtctccatattttcaacatcatcatcccatcagtgcaccaggattta
catgaacatctattcagtcactttccatgccttctagcctgcctggaacatcgctactca
gctgtcagaaacgcagccgctcgtagcttggctaccatcgcgcgtgtggctagcgtcatt
accatagaagccgtcgtcgtcaggcacttgctgtcgtggttgcaagatccggtgaatgac
aaccgcaagatgggagctgtcgaggcaattagtctaatcgttgaagagctgtcgataggg
atcctgccctacataaccagtttagttttggcgctcctgggagttatgagctatcaaaat
aagcaagtaagacacgtggctaccttcacctttgccaatctcgtctgcctcatgccttta
gaaaaaccagtgtcgcaatcaaccaacgatggcgatgttaaaacttcatcatcaacaaca
acagcaacatcatcaacaacagcatcatcatcatcatcaacaacaacatcatcaacaaca
tcatcatcatcattaacaacaacatcatcaacaacaacatcatcatcatcatccgtaatg
acgtcatccacaacatcatcatcatcagtaatgacgtcatcgtcgtcaccatcatcagca
gtagttgaggctaaaataaaacaggatagaacgtttttagagcagctactgaaccccaag
ctgattgaagattataaggtaccgctgaagttgaaagttcaactgaggaggtatcaacag
gacggcatcaattggctctccttcttggcccgtttcaaactgcacggcattttgtgtgac
gacatgggtttgggcaaaaccctgcaagccctctgcatcgtggcagccaatcatcacgag
agagaaatacgattggctaagaagaaggtgaaatacgagagcccgccctctatcgttata
tgccccccaaccctgaccgctcattggctgtacgaagctgagaagaccctaccagacggt
ctcattcgaaccttgcactacataaaatggaactattgcatattagacgagggacacatt
attaaaaataacaagacgaaagtatcaaaggcaataaaacagctgcggtgttctcacagg
ttgatactatcaggcacccccattcagaacaacgtcctggagctgtggtcacttttcgac
ttcctcatgccggacacaaaaatcatgggtcacagaaattatcaaatcaaagttacaatc
aaagttacaatcaaagtcgttgtaaaaacaaagacacaaagatcattggtatcgtaa
DBGET
integrated database retrieval system
