Helobdella robusta: HELRODRAFT_192423
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Entry
HELRODRAFT_192423 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
hro03015
mRNA surveillance pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_192423
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_192423
03015 mRNA surveillance pathway
HELRODRAFT_192423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_192423
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_192423
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
HELRODRAFT_192423
Spliceosome [BR:
hro03041
]
Common components
Common spliceosomal components
Cap binding complex
HELRODRAFT_192423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DNA_pol_phi
CDC45
Motif
Other DBs
NCBI-GeneID:
20212278
NCBI-ProteinID:
XP_009020980
JGI:
Helro1_192423
UniProt:
T1FTY1
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MTTRNVSRNEDSDDEFMSKRKKLTSGIEERIENLICRVGDKSINSSLESNIEGLATALET
DMCSYKAHITKVICECIRDLPERVSVYSTLVGLINFKNYKAGGDVVDCAMKFLKVSIRGE
EYEDACTFTYFLSDLVNCRVVMTSSIIDLYNTFIEAALEENSNRPRSDWLMYVVMSSLVY
SAHELSIKKEADFDRLLKVIEKYINQRNKDVYIAFAVWCAPQQGSFEETITTRPYVAFEE
IFREALQHTIPPLCIPSPLVPQPPQKSLSSTSSSSPSLATDSLYKEEFYPLPRMVFRLFD
NSDLLDDMPRFPDSNSIESADILIRTTFRVKVPINYIIVEAILGEIFELPKERHLPLLYG
ALLIEICKQRSALLPQVGLNASRIDVFVQTLLYLASKTLSHSFSAITKYHKLLKDSVEGA
TKQETTQLQVALLSSLQYVWKNRPQMIEVIVDKLLKTQIISCSSVVAWVLSEPMVAHLNC
FYISHILASTLDKMHTQLSKTLKELENLKKQSSTYKKPKRHLGVDDYNDDDDDRKNDDDD
ERNDDQDDDDLDLGRYNVKRTQFDDEIDAEEKKAQQLKQEIKIIHCHIIKNIVNVLSDHI
HLCENDGLSHEVPMYKILKDRLQEYLYKYHEFTYQYTGYLSTSVFTGDVDPDILHIYNNF
TNLLAPVSN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgaaacgtttccagaaatgaagacagtgatgacgagttcatgagtaaacgt
aaaaagttaacctcgggcattgaggagaggatagagaatttgatctgtcgagtcggtgat
aagtcaataaattcatcattggagagcaatatagagggtctggcaacagctctcgagaca
gatatgtgtagctacaaggcccatatcaccaaagtcatatgtgaatgcattcgagacctg
cccgagagggttagtgtgtactcaacgctggtcggcctgatcaacttcaaaaactacaaa
gcgggcggagatgtagttgattgcgcaatgaagttcctgaaagtttcaataaggggtgag
gagtacgaagatgcctgtacatttacttacttcttgtcggatctcgtgaattgtagggtg
gttatgacgtcatcaatcatcgatctgtacaacactttcattgaggctgccctagaggag
aactccaatagaccacgctctgattggttgatgtacgttgtgatgtcatcgcttgtttac
tcggcgcacgagctgtcaatcaagaaggaggcagactttgataggctgctgaaggtcatt
gagaaatacatcaaccaaaggaataaggatgtctatatagcatttgctgtctggtgcgct
ccgcagcaaggaagttttgaggagacaatcaccacccgaccttacgtggccttcgaagaa
atttttcgtgaggcgctccagcacaccataccccccctttgcatcccctccccactggtt
ccacagcccccccaaaagtcattatcttcaacgtcgtcgtcttcgccatcgctggccact
gattccttgtacaaggaggaattctacccattaccccggatggttttcagattgttcgac
aactctgatctgctagacgatatgccaagatttcctgacagtaactctattgagagcgct
gacatactgatcagaaccacgttcagagtcaaagtacccataaactacatcatcgtagag
gcaatacttggcgagatatttgaactgccaaaggagcgtcacctgcctctattgtatggc
gctttgttaattgaaatatgcaagcagagatctgccttgttgcctcaagtgggactaaac
gccagtcgaatagatgtctttgttcagacactcctttacctggcatctaagacgctcagt
cactcattctccgccatcaccaagtaccacaagttgttgaaagattcggtggagggagct
acgaagcaggaaacaacgcagttgcaagttgcgctactgtcgtcgctgcaatacgtctgg
aaaaataggccgcagatgattgaggtgatagtcgacaaattgctgaaaactcaaatcatc
agctgttcatcggtggtggcttgggttctttctgaaccaatggtcgcccatctcaattgc
ttctacatcagccacatactggcatccacacttgacaagatgcacacacagctaagcaag
actctgaaggagttggaaaatctcaagaaacaatcctccacctacaaaaagccgaagcga
catctgggcgtcgacgactacaacgacgacgatgatgaccgcaaaaatgatgacgatgac
gagaggaatgacgatcaggacgatgacgaccttgacctcggtaggtacaacgtcaagagg
actcagttcgatgatgagatagacgctgaggagaagaaggcccagcagctgaagcaagag
attaagatcattcattgccatattattaagaacattgtgaacgttctatctgatcacatt
catctctgtgagaatgacggcctctcacacgaagttcccatgtacaagatactcaaggat
aggttgcaggaatatctctacaagtaccacgagttcacgtatcagtacactgggtacttg
agtaccagcgtcttcactggagatgttgatccggacatactacacatctacaacaatttc
actaatctcttggctccagtttcaaattaa
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