Helobdella robusta: HELRODRAFT_192588
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Entry
HELRODRAFT_192588 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
hro
Helobdella robusta
Pathway
hro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
HELRODRAFT_192588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_192588
Enzymes [BR:
hro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HELRODRAFT_192588
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
HELRODRAFT_192588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
20212335
NCBI-ProteinID:
XP_009021361
JGI:
Helro1_192588
UniProt:
T1FU39
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MFSVRIVTTDHHMVDPVPGLDLTYSEFRKQPVYKVPVINIFGATPSGQKTCLSIHGVFPY
LYVPVDKGFVPSDTQLLLLAGSIDRALNMALGRSASTAQHVFKIIPVSGIPFYGYHAREQ
TFLKIFLYNPKMIKKVADLLLAGAVMNRTFQPHETHVPYNLQMFIDYNLFGMNFINLSAV
KFRRPLPTSAACKILSVSEDCDSVVMWTVESVRRKPKLIEAEEILKSDFELLIKESTEDE
EVEDAMKSDDGETSTPSTNESMNGSLWGSSFNPDDFIDLNETIVSEDVVCSVVSNSENFI
KDTNDVDQSFIDLLLSLANSNSQSTNAQPSQPMRKLAEMEDCDSPLSQCTPKRRGLLKIQ
MIPLKIHMISLKIQMIPLKIQTIPLKVQTKYLPEFKGSMNNCFHDVMMKNYASLQQNNNK
NINNSYVNNNNNNGVLFNSVASCLDDNIEIILVPHRKPPKYSDVSSVRSRYSGSSSNNKN
DKNSSRMKNDDIIANRNTKDIKSNKSNNIHLTSNIDLGVINKNINYNYINNNINKYNDSS
PNDSSFGSTTGKFNSTNCSLLSETFSTPKSILKKRPLVESTPCLLRSNNNYNINVISNSS
RVSSVFNDDDTFLDNTNHAPSIDSILEELDIDLSLVIPQTPDSSPTNLSTEMHSTTLTPT
STPTTTLEQQVTSTSFTPTQTLTMPMTTTKTTTATSVLQTSTSATTTSTTTPTTTPTTTN
PTTAKRRKVTFIETPKKDRLSSSTPYTKLTGRMKLGKNFNLTPIKKWNDVTSAHNNNNNN
NNNNNNNNNNNNNNNNININIFANFKSGNTNRPSNNNNGINNFSTYNCNNNSNNNENSDS
KFSLSNKNSTIDDTVLNNSNDCTITSKSDYNKTINNDSVNVNSIFSTTTTTAAAAAATTI
ATKSTTAKRQSIESQIETATPTNTFNFKVDSQNFQKVKEATEQLLKADLNELSNLMYHHH
ATVTFLQTEIDLITTVVDLVKKHDADILVGFEVKTLSWGYLIALNIYTFENLAFHVLHRR
YPHFSHHTLTNWFQGKARFNRWKTLDYYTVRSLGNLQIMEKLNIIDQTSEFARIYGIEFF
NVLNRGSQYRVESMMLRLAKPKNFIAVSPGIHQRAGMKSMECIPLNLEPRSDFYTDPVVV
LDFQSLYPSIMIAHNYCFSTCLGRIKSIANCRDGPFEFGCTSLYIPKHVLKSLKYDDINV
CSNGVAFVKPHIRKGIISQMVEEILNTRVMVKKAMKVHKNDKGLQRTLHARQLGLKLIAN
VTFGYTAASFSGRMACVELGDSIVRKARDTLEQAIRLVEQTEKWAAQVIYGDTDSMFVLL
RGRTRQQAFVVGQEIADAVTNSNPKPVTLKLEKVYMPCVLQTKKRYVGFMYETPDQQEPT
FHAKGIETVRRDNCPAVSKILERSLKTLFTSCDISLVKKYVQRQCIKILEERTPLKDFIF
AKEYRGMAGYQPTACIPALEIARRRLARDRRSEPLVGQRVPYVIIFGSPGLPLIKLVREP
GELLSNSNLRINYTYYLMKQILPPINRFAMLFGLDAFHWYDGLPRVLKVNSRIFNPALAI
TSRNNQVNDHFKHSPVKSSKLVNENLTKYFTSVDCPICGQLTNAGMCELCKTDDRRRVLI
SSCRIRKVQARQNCVNQICNTCKGWIDAKNSCDSLDCPILYKDHRLNSEAFCLDALFKVL
DLEF
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagtgcgtattgtaacaactgaccaccacatggtcgatcctgtgccaggcttg
gacttgacctattcagaatttaggaaacagcctgtctacaaagtcccggtcattaatatt
tttggggctacgccctctggtcagaaaacatgtttatcgatacatggggtatttccttac
ttgtatgtaccagttgacaaaggtttcgtaccgtctgacactcagctgttgttgctggca
ggcagtatcgatcgggctctgaatatggctctcggtagatcggcctcgactgcacagcat
gtcttcaagatcattcctgtatctggcatacctttctacggctatcatgccagggagcag
acgttcctgaaaatttttctctacaatccaaagatgattaaaaaggtagctgatttatta
ttggccggtgcagttatgaatagaacatttcagccacacgagacgcacgttccttataac
ctccagatgtttatagattacaatttgtttgggatgaattttataaatctttcggcggta
aagttcagacgacctttgcctacgtcagcagcttgtaaaatattgagtgtatctgaggat
tgtgattctgtcgtcatgtggacggttgagagcgtcagaagaaagccgaagctgattgag
gcggaagagattttgaaatcagatttcgaactgctcatcaaggaatccactgaagatgag
gaagttgaagatgcaatgaaatcagatgacggtgaaacatcgacaccatctacgaatgaa
tccatgaatggttctttgtggggttcctctttcaatccggacgatttcattgacttgaat
gagaccatagtgagtgaagacgtcgtgtgcagcgtcgtaagcaacagcgagaatttcatc
aaagacactaatgatgtcgaccaatcatttattgatttgctcttgtcactggccaatagc
aattcccaatccacgaacgctcaaccatctcagccaatgagaaagctcgctgaaatggaa
gactgcgattcgccgttatcacagtgcacgcctaagcgtagaggcctgttaaagatacaa
atgatacctttaaagatacatatgatatctttaaagatacaaatgatacctttaaagata
caaacgatacctttaaaagtacagacaaaatatttgcctgagttcaaagggtcaatgaat
aattgctttcatgatgtgatgatgaaaaattatgcctctctacaacaaaacaacaacaaa
aacatcaacaacagttacgtcaacaacaacaacaacaacggtgtgctatttaatagtgtc
gcttcatgtttagacgacaatattgagattattttggtgcctcatagaaaaccgccgaag
tacagtgatgtcagcagcgtcagaagtcgctacagcggcagcagcagcaacaacaaaaat
gataaaaatagcagtagaatgaaaaacgacgatattattgccaacagaaatactaaagac
atcaagtcaaacaaaagcaataacatccaccttactagcaacatcgaccttggcgtcatc
aacaaaaacatcaactacaactacattaacaacaacattaacaagtacaacgactcaagc
ccaaacgactccagttttggaagtacaacgggaaaatttaattcaacaaattgttccttg
ctctctgaaactttctcaacaccaaaaagcattttgaagaaaagacctcttgtggaaagt
acgccatgtttgttgcgcagcaacaataactacaacataaacgtcatcagcaacagtagc
cgcgttagtagcgtcttcaacgacgacgacactttcttagataacacaaaccacgcacca
agcattgactccattttggaagaactggatatcgatctttcactggttatcccacaaaca
cctgattcatcgccgacaaacttatcaacagaaatgcattctacaacattaacgccaaca
tcaacgccaacaacaacattagaacaacaagtgacatcaacatcatttacaccgacacaa
acattaacaatgccgatgacaacaacaaaaacaacaacggcaacatcagtactgcagacg
tcaacatcggcaacaacaacttcaacaacaactccaacaacaactccaacaacaacaaat
ccaacgactgcgaaacgtagaaaagtcaccttcattgaaactccaaaaaaggatcgcctt
tcatccagtacaccttacacgaaactaacaggtcgtatgaagctaggtaaaaatttcaac
ttgacacccattaagaaatggaacgacgtgacatctgctcataataataataataataat
aataataataataataataataataataataataataataataataatataaacattaac
atttttgctaattttaaaagcggtaacactaatcgacctagtaacaacaataatggcatc
aacaatttctccacttacaactgcaacaacaacagcaacaacaacgaaaatagcgacagt
aaatttagtcttagcaacaaaaacagcacaatcgacgataccgttctcaacaactctaat
gattgtactatcactagcaagagtgactacaacaagactatcaacaacgattctgtaaat
gttaacagtattttttcaacaactacaacaacggcagcagcagcagcagcaacgacaata
gcgacaaaatcgacaacagcgaaacgtcaaagtatcgaatctcagatcgagacagccaca
cctaccaacacgttcaacttcaaagtggattcgcagaactttcaaaaagttaaggaggct
acggaacagctactaaaagcagatttaaacgagttaagtaatttaatgtaccaccatcat
gcgacagtcacatttctacaaacagagatcgacctaattacgacggtcgttgaccttgtt
aaaaaacacgacgcagatatcttggttggcttcgaggtgaagacactttcatggggttac
ctgatagcattaaacatttacacattcgagaacttggccttccatgtgctacacaggcgc
taccctcacttctcacatcacactctcaccaactggtttcagggaaaagcccgtttcaat
aggtggaaaaccctggactactatacagtacgcagtttgggcaacttgcaaatcatggaa
aagttgaacatcatcgatcagacgagtgaattcgccaggatatatggcattgaatttttc
aacgttctaaacagaggctcgcaatacagagttgagtcgatgatgttgagactggcgaag
ccgaagaacttcattgcagtctcacctggaatccaccagagagccggtatgaagtcgatg
gaatgcataccgctcaacctcgaaccgagatccgatttctataccgacccggttgtcgtt
ctcgattttcagtcgctctatccatcgatcatgattgcgcataactactgcttttccact
tgcctcggtcggataaaatcgatcgcgaattgtcgggatgggccgtttgaattcggatgc
acatctctttacataccgaaacatgtcttgaagagcctcaagtacgatgacataaacgtt
tgtagcaatggcgtcgcctttgtaaagccgcacatcagaaaaggaatcatttctcaaatg
gtagaagagatactgaacacgagggtcatggtcaaaaaagccatgaaagtccacaaaaat
gacaaaggtctacaaagaaccttacatgccaggcagttagggctgaagttgatagctaat
gtcacttttggatatactgcggccagtttctccgggcggatggcctgtgttgagctcgga
gacagcattgtgaggaaggccagggacactttggaacaagcgatacgattggtcgaacaa
actgaaaagtgggcggcgcaagttatttatggcgataccgatagcatgttcgtactgctg
aggggcaggacgaggcagcaagcgttcgtcgtcggtcaggaaatcgccgacgccgtcact
aacagcaatcccaagcctgtcactttgaaacttgaaaaggtgtacatgccgtgtgtgctg
cagacgaagaagaggtacgtcggcttcatgtacgagacaccagaccagcaggagccgaca
ttccacgccaagggtatcgaaactgtcaggagagataattgccccgctgtttccaagatt
ttggagagatcgctgaaaacattgttcacatcgtgcgacatatcattggtgaagaagtat
gttcagaggcagtgcatcaagattctggaggagagaacgccgttgaaggacttcatattc
gccaaggagtaccggggcatggctggctaccagccaactgcttgcatacccgctcttgaa
attgccagacggcggctggcgagagatcgtcggtcagaacctttggtgggtcaaagagta
ccctacgtcatcatcttcggttctccgggtctgccacttatcaaattagtcagggaacca
ggtgaactattgagcaactccaaccttcgtatcaactacacttattatctcatgaaacag
attctcccacccatcaaccgattcgccatgttgtttggcctggatgcttttcactggtac
gatggattgccacgcgttcttaaagtcaactctcgaattttcaatcccgcccttgctatt
acatcaagaaacaaccaagtgaacgatcatttcaaacacagcccggttaaaagtagcaaa
ctagttaatgaaaatcttacaaagtattttacgtctgtcgactgtccgatctgtggtcag
ctaacaaatgccggcatgtgcgaactctgcaaaactgacgatcggaggcgcgttctaata
tcgtcctgtcgcatcaggaaggtacaagctagacagaactgcgttaatcaaatttgtaac
acatgcaagggatggatagacgccaagaattcctgtgattcacttgattgtcctatccta
tacaaggaccacagactgaactctgaagctttttgcctggatgccttgttcaaagtttta
gatttagagttttaa
DBGET
integrated database retrieval system