Helobdella robusta: HELRODRAFT_192813
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Entry
HELRODRAFT_192813 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14320
aladin
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_192813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_192813
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_192813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
20212414
NCBI-ProteinID:
XP_009022178
JGI:
Helro1_192813
UniProt:
T1FUB8
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MCSLSQFPSVVSVSSLATACEKNGHLISCKSSTNQQSELIGFGDVNCATEKCKFFKTREL
TARSAFIRSELSKKNKLLQAWSKDGFSGLFNELIPNHNQDSSEGSLFSHWLTKLLSICQS
YTWASPPSVPAEEIITAFSQTRNWKSSYIRCFAWHPHAQKLAIALKDDEILIKHHGGVGC
SSSSGGGSSVSGGYKTSSSTSLSQNDDVRPLKHPRQRCISCLCWKPFSSSDLAVASFDCI
LIWHVTSSSSSSSSSAASSHFSSSSSSSTALPSSSSSLLPSSSSSSVQVLSIDKSGLVGW
IEWSRDGSRLVGCYPGLGNVMIWNTDLEQYTPLQNFNLIDAIIHVALALTTTTTATTTTP
ITLTTPDFNTISNTSFNNGSKLNSSNRGDFFNGSGGGNSFNNNNNNKYNYNYNNKYNYDN
NNVLTSFSPDGLKLAVSCSGTCLRVWDCTSWRCLSLKSKLGRCQSISWSPDSSTVLFTVQ
SEPTVYCLTLTQSADLSKPLLAAKPVRAVLTLDQGVFRLIRENDDGGGNCEEDDDGCAGV
SEVCIGGLVQQMVWDEHGERLAVSFKSQSSSAFIALFRTRCMPTFEANLIGFIRGKANET
IACMSFKPHFQYGSLLSLAWSTGRIAHVPLFYTPGTSSTLNDRHKKFGVFDHDVTANITA
ASFNDTTATNFDTSICRSSGSVLRDAAKMGYDYDLYAAPDKDFGYDYGAAATTTAAAAGG
SGGSDDFDEKIISGFFSGSENRSGKVNLYSVRK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcactttcacaatttccatctgtggtctcggtgagtagtttggcgacggcctgc
gagaaaaatggacacttaatatcgtgcaagagtagcactaaccagcagtctgaactaatt
ggcttcggagatgtgaactgcgcgactgagaagtgtaaatttttcaagacgagggagctg
actgccagatcggccttcatcaggtccgaactctctaagaaaaataaattactacaagcc
tggtccaaagatggattttctggtttattcaatgaactgatacccaatcataatcaggac
tcaagtgaaggatccctcttctctcattggctgaccaaacttttatccatctgccaatca
tatacctgggccagcccgccgtcggtcccagctgaagaaatcatcactgcttttagtcaa
actaggaactggaaatccagttacataagatgctttgcctggcacccacatgctcaaaaa
cttgccattgcacttaaagatgatgaaatcctaatcaaacatcatggcggcgttggttgt
agtagtagtagtggtggtggtagtagtgttagtggtggttacaaaacgtcatcatcgacg
tcattgagccagaatgatgacgtcagaccgctgaagcatccgaggcagagatgcattagt
tgcctttgttggaagccattctcttcatctgatctcgccgttgccagcttcgattgcata
ctgatctggcatgtgacgtcatcatcgtcatcatcatcatcatcagcagcctcgtctcat
ttttcatcatcatcatcatcatcgactgcgctaccatcatcatcatcatcattactgccg
tcgtcgtcatcgtcatcagtgcaagttctctccattgataaatccggattagtcggatgg
attgagtggagtagggatgggagtagattggttggctgctatcctgggcttgggaacgtg
atgatatggaacacagatctggagcaatacaccccactccaaaactttaacctcatcgac
gccatcatccacgtcgctctcgccttaaccaccaccactactgccaccaccaccacccct
atcactctcactacccctgatttcaatactatttctaacacctccttcaataatggtagt
aaactcaacagcagtaatagaggtgacttctttaatggtagtggtggtggtaatagtttt
aataataataataataataaatataattataattataataataaatataattatgataat
aataacgttttaacgtcattctcccctgatggattgaagctggccgtgtcttgttctggc
acgtgcttgagagtttgggattgtacaagctggagatgtctctcgttgaaatcgaaactc
ggaagatgtcagtcgatttcttggagtcccgacagttcgacggtcctctttaccgtccaa
tcagagcccaccgtttattgtttaaccttgacccagtcagctgatctaagtaagccccta
ttggctgcaaaaccagttagggcggtcctcactttggaccaaggggtgttcagactgatt
agagagaatgatgatggtgggggaaattgtgaggaagatgatgatggttgtgctggtgtc
agcgaagtttgcatcggcggcctggttcagcagatggtctgggatgagcatggagaacga
cttgctgtctctttcaaaagtcaatcatcgtctgctttcattgcgttgttcagaacaaga
tgcatgccgacttttgaagccaatctgataggatttataaggggaaaagccaacgaaacg
attgcctgcatgtcattcaaacctcattttcaatatggttcgcttttaagcctggcctgg
tcaactggaaggatagcccacgtcccactgttctacacgcccggaacgtcgtcaacgtta
aacgatcgtcacaaaaagtttggtgttttcgatcatgacgtcactgctaatattactgca
gctagctttaatgatactactgctactaattttgatactagtatctgtcgtagtagtggt
agcgtccttagggacgccgccaagatgggctatgactatgatctctacgctgctccagat
aaggattttggttatgattatggtgctgctgctactactactgctgctgctgctggtggt
agtggtggtagcgatgatttcgacgaaaagatcatttcaggatttttctctggtagtgaa
aacagaagtggaaaggtcaatttgtattctgtaagaaaatga
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integrated database retrieval system