Helobdella robusta: HELRODRAFT_193196
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Entry
HELRODRAFT_193196 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
hro
Helobdella robusta
Pathway
hro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HELRODRAFT_193196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_193196
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
HELRODRAFT_193196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_like
Beta-prop_LRRK2
Beta-prop_Aladin
Beta-prop_NWD2_C
HEAT
Motif
Other DBs
NCBI-GeneID:
20212553
NCBI-ProteinID:
XP_009024226
JGI:
Helro1_193196
UniProt:
T1FUQ7
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSAQAVYKLHHVEFFDFTPKPINCMAFDCKTKRLAVSRFDAESSYIEIWNSNENWLLERI
LPPTSLIECMVWYKNRLLIGGLNGSLVHVDLKTSSMKEPQSSNHGAIWCMAVNPNEKLIA
AGTEGGCVVLFEAIEDDVVYKKAIVRQEGRILSICWHLELNVLLTGSSDVRVYNAETGSL
LQRISVASSSNILVWALAVTKDFTIISGDSSGQTAFWYGLPCKLSHIATSADRHLPISTP
EKKLLCITSETHVLCSCVSSCATWLAFSNEKTTALYRIKMKHLDSDKPLVRATATECLST
FTSTPSTHLAIGGSSVVASLSKFNVVTFLDLCKILHQLPWNERSCINLDYHPANPHLILL
TYSDGRISEFDVSLGSLTPISKSWSNKHHQNFVDHLNKKLKSSRISRFFYDITSYDGDGG
SGGGRIVGQHTSGFSVIQWGKLVDGKKAVSWDLFEFYNTHNLHHVDVMNDNSLVLVEQTD
IDLILQYAPPLKKPKLFGV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaggccgtttataaacttcatcatgtcgaattcttcgattttactccgaaa
ccaatcaattgtatggcttttgattgtaagacaaaaagattggccgtttccaggtttgat
gcggaatcttcatacattgaaatatggaattctaatgaaaactggcttctagagcggatt
ctgcctccgacatcactgatcgagtgcatggtctggtacaagaacagactgctcattggg
gggttgaatgggtcgctggtgcacgtcgacctcaaaacctcatcaatgaaggagccacaa
tcatccaaccatggagcgatatggtgcatggccgtcaatcccaacgagaaacttattgca
gcaggaacagagggtggatgtgtcgtgttgtttgaggccatcgaagatgatgtcgtctac
aaaaaggctatcgtcagacaagaaggtcgcatcctttcaatatgctggcacctggagttg
aacgtcctgctgacaggaagtagtgatgtgcgtgtctacaatgcggagacgggctcgttg
ctacagcgcatctccgtggccagttcgagtaatattctcgtctgggctctcgctgttacc
aaggattttacgataataagtggtgactcgtctggtcagactgcattctggtatggcttg
ccttgtaaactctcgcatattgcaacatcagcagacagacacctgcccatctcaacgcct
gagaagaagttgctttgcataacatcagaaacacacgtgttgtgttcctgtgttagctcg
tgtgcaacctggctggcattctcaaacgaaaagactactgccttgtataggatcaagatg
aagcatctggactcagacaagccactagtcagagccacagccaccgagtgtctatcgacc
ttcacctcgacaccgtcaacccacctcgcaatcggcgggtcctctgtcgttgcatccctg
tcaaagttcaatgtcgtaaccttccttgacctttgcaagatactacaccagctcccctgg
aatgaaagatcgtgcataaacctcgactatcacccagccaaccctcacctcatccttctg
acgtacagcgacggccgtatttcagagtttgacgttagcctgggttcgctcacaccaatc
agcaagtcctggagcaacaaacaccatcaaaacttcgtcgaccacctcaacaaaaaactc
aaatcttctagaatttcgagatttttttacgacatcacaagttatgatggtgatggtggt
agtggtgggggtagaatcgtggggcagcacacttcagggttcagtgtgattcagtggggg
aagctggtagatgggaagaaggctgttagttgggatctcttcgagttctataatacacat
aaccttcaccacgtcgacgtcatgaacgacaattcattggtcctcgtggaacagacagac
attgatctaatcttgcagtacgcacctcccttaaagaaacctaagctatttggagtttaa
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