KEGG   Helobdella robusta: HELRODRAFT_193196
Entry
HELRODRAFT_193196 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
hro  Helobdella robusta
Pathway
hro03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HELRODRAFT_193196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hro03009]
    HELRODRAFT_193196
Ribosome biogenesis [BR:hro03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    HELRODRAFT_193196
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_THOC3 Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR5 Beta-prop_EML Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_VPS8 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_like Beta-prop_LRRK2 Beta-prop_Aladin Beta-prop_NWD2_C HEAT
Other DBs
NCBI-GeneID: 20212553
NCBI-ProteinID: XP_009024226
JGI: Helro1_193196
UniProt: T1FUQ7
LinkDB
Position
Unknown
AA seq 499 aa
MSAQAVYKLHHVEFFDFTPKPINCMAFDCKTKRLAVSRFDAESSYIEIWNSNENWLLERI
LPPTSLIECMVWYKNRLLIGGLNGSLVHVDLKTSSMKEPQSSNHGAIWCMAVNPNEKLIA
AGTEGGCVVLFEAIEDDVVYKKAIVRQEGRILSICWHLELNVLLTGSSDVRVYNAETGSL
LQRISVASSSNILVWALAVTKDFTIISGDSSGQTAFWYGLPCKLSHIATSADRHLPISTP
EKKLLCITSETHVLCSCVSSCATWLAFSNEKTTALYRIKMKHLDSDKPLVRATATECLST
FTSTPSTHLAIGGSSVVASLSKFNVVTFLDLCKILHQLPWNERSCINLDYHPANPHLILL
TYSDGRISEFDVSLGSLTPISKSWSNKHHQNFVDHLNKKLKSSRISRFFYDITSYDGDGG
SGGGRIVGQHTSGFSVIQWGKLVDGKKAVSWDLFEFYNTHNLHHVDVMNDNSLVLVEQTD
IDLILQYAPPLKKPKLFGV
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtcggctcaggccgtttataaacttcatcatgtcgaattcttcgattttactccgaaa
ccaatcaattgtatggcttttgattgtaagacaaaaagattggccgtttccaggtttgat
gcggaatcttcatacattgaaatatggaattctaatgaaaactggcttctagagcggatt
ctgcctccgacatcactgatcgagtgcatggtctggtacaagaacagactgctcattggg
gggttgaatgggtcgctggtgcacgtcgacctcaaaacctcatcaatgaaggagccacaa
tcatccaaccatggagcgatatggtgcatggccgtcaatcccaacgagaaacttattgca
gcaggaacagagggtggatgtgtcgtgttgtttgaggccatcgaagatgatgtcgtctac
aaaaaggctatcgtcagacaagaaggtcgcatcctttcaatatgctggcacctggagttg
aacgtcctgctgacaggaagtagtgatgtgcgtgtctacaatgcggagacgggctcgttg
ctacagcgcatctccgtggccagttcgagtaatattctcgtctgggctctcgctgttacc
aaggattttacgataataagtggtgactcgtctggtcagactgcattctggtatggcttg
ccttgtaaactctcgcatattgcaacatcagcagacagacacctgcccatctcaacgcct
gagaagaagttgctttgcataacatcagaaacacacgtgttgtgttcctgtgttagctcg
tgtgcaacctggctggcattctcaaacgaaaagactactgccttgtataggatcaagatg
aagcatctggactcagacaagccactagtcagagccacagccaccgagtgtctatcgacc
ttcacctcgacaccgtcaacccacctcgcaatcggcgggtcctctgtcgttgcatccctg
tcaaagttcaatgtcgtaaccttccttgacctttgcaagatactacaccagctcccctgg
aatgaaagatcgtgcataaacctcgactatcacccagccaaccctcacctcatccttctg
acgtacagcgacggccgtatttcagagtttgacgttagcctgggttcgctcacaccaatc
agcaagtcctggagcaacaaacaccatcaaaacttcgtcgaccacctcaacaaaaaactc
aaatcttctagaatttcgagatttttttacgacatcacaagttatgatggtgatggtggt
agtggtgggggtagaatcgtggggcagcacacttcagggttcagtgtgattcagtggggg
aagctggtagatgggaagaaggctgttagttgggatctcttcgagttctataatacacat
aaccttcaccacgtcgacgtcatgaacgacaattcattggtcctcgtggaacagacagac
attgatctaatcttgcagtacgcacctcccttaaagaaacctaagctatttggagtttaa

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