Helobdella robusta: HELRODRAFT_193569
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Entry
HELRODRAFT_193569 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_193569
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_193569
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
HELRODRAFT_193569
Spliceosome [BR:
hro03041
]
Complex C
Other components
EJC/TREX
HELRODRAFT_193569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
20212695
NCBI-ProteinID:
XP_009026523
JGI:
Helro1_193569
UniProt:
T1FV49
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MFHKGKEMNISGDSMMQLKAELIKKQDEFKRLKLENSSRPIKKRKIETKSSVEKKNVGVD
KRSQKDLEEKLEELNTFQKSKNTLEKKAKLYEKMSQQMLNDEDYQKLPFLVDFEQKVIDK
SIEKKRKQNLLEEKMKAARAKLTSNEKNDNNVNRPGVKRKNSDNEDDDEYENDGDDDDGS
LYKSNNPDEQWVEFEDSLGRTRRCLKKDLEHFKSLDKKLNINKPDQKELINNSMVEPELM
SNDMRREIERRKWEEEVTKMRMKDEIHYSDVTFNEIRDHGVGFYNFARDEETRKEQMKVL
DQLRQQTKIQRKIFSSLKEKRKRALDIRLAKVMQRSIVQEAIKLSGLDPLTFIGEYPFNA
FQLIFLISVFEMNIMVCNCMTTSTLSFNRHHGTIVDKNSTFMTCIYEDDDDENEEAFTGP
RPPDVAPNNADVLAGKECDDGEDIIEEWKRDDSWRKNAPVREWDVGKKSELFYEDEVWLK
KRRSERVKEFAPPTAFYDSQSDDRLHGGKRKNNNDVKLNSRDFFKSKLHFYKDSGDVSME
TTEDSKTEIKNDKNNDALSDDCISLDDQISATLKEIRGGSVGLEVPVPDENNNKNIENMD
IGSINISTSIFNPSISSSSSSSSSSTAPTASNSQHVSNACDSFNSYNVFPYNSSSHDINY
MNTAITTTPHEPQQPHLQQQQQPQQQHVSGPQPAHFSCGPMKCQPQSRPARYEPIHIHEI
PLTLPPPLSTNYPSQEKFICKSENSNNNEQRNIKKWQQQFNTSNSTNKNNNINNNDGNTY
AINPDTLDQQVSFSSSSTPSSSSSLLISELKPSSLPFASSFIQSQQLGKSVSDRAAEQFD
PTVPPPNVKGHVPSS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtttcataaaggaaaagaaatgaacattagtggtgattcaatgatgcagttgaaggca
gagcttattaaaaagcaggatgaattcaagaggctgaaacttgaaaattcctcccgacca
attaagaaaaggaaaattgaaacgaaaagttctgtcgagaaaaaaaatgttggagttgat
aaacgatctcagaaagatttggaagagaaattagaagaacttaacacatttcagaagtcc
aaaaatactctggaaaagaaagccaagttgtatgaaaaaatgtctcaacagatgctcaat
gatgaggactaccagaagttaccatttcttgtggattttgagcagaaagtgattgacaag
tcgatcgagaagaagcgaaaacagaacttgctggaagagaagatgaaagcagctcgagcc
aaactgacgagtaatgagaagaatgacaacaatgttaacaggccaggagtaaaaagaaaa
aattctgacaatgaagatgatgacgagtatgaaaatgatggtgatgatgatgatggaagt
ttgtacaagtccaacaatcctgatgaacaatgggtggagtttgaggatagcttaggcagg
accaggagatgtcttaaaaaggatctcgagcacttcaaaagtttggacaagaaactgaac
atcaataaaccagatcagaaagagctgattaacaattctatggttgaaccagagttgatg
tcgaatgatatgaggagagagatagagagaagaaaatgggaggaggaggtaacgaagatg
aggatgaaagatgaaattcattactctgatgtcaccttcaatgaaattcgagaccacggt
gttggcttctacaattttgcgcgagatgaagagacgaggaaggagcagatgaaagtgctt
gaccagctgagacaacagaccaaaatccagcgaaaaatattttcatcgttgaaagagaag
aggaagcgcgcccttgacattcgactggcgaaggtcatgcagaggtcaatagttcaggag
gccatcaagttgtcaggactggatcctctcactttcattggtgagtatccttttaatgca
tttcagttgatctttctaatttctgtattcgagatgaatatcatggtgtgcaactgcatg
acaacctcgaccttatctttcaaccgtcatcacggcaccattgtagataagaactcaaca
ttcatgacgtgcatctacgaggatgacgatgatgaaaatgaagaggcgttcactggtccc
aggccgccagacgtggcccccaacaatgctgacgtcctggcaggtaaagaatgcgacgac
ggtgaggacatcattgaagaatggaagagagatgattcttggaggaagaatgctccagtt
cgagagtgggacgtcggaaagaaaagtgaacttttctatgaggatgaggtgtggctgaaa
aaacgaagatcagaaagagtgaaagagtttgctccgcccaccgctttctacgacagccaa
tcagatgatcgcttgcatggtggcaaaagaaagaataataatgacgtaaagttgaatagc
agagatttcttcaaatcgaaattgcacttctataaagacagcggtgatgtatccatggaa
actactgaagacagcaaaactgaaattaaaaatgataagaacaatgatgccttgagtgat
gattgcatatcattggatgatcagattagcgccactttgaaagaaattagaggtggttcg
gttggtttggaggttccggttcctgatgaaaacaacaacaaaaacattgaaaacatggat
attggaagtataaacattagcaccagtattttcaatccaagcatatcatcgtcgtcgtcg
tcgtcatcgtcatcaacagcaccaactgcaagcaacagccagcatgtttccaatgcgtgt
gacagcttcaactcatataacgttttcccatacaacagcagtagccatgatattaattat
atgaatacagcaattactacgacaccacacgagccacagcaaccacacctccagcagcaa
cagcaaccacaacaacagcacgtctcaggaccgcaaccagctcatttctcgtgtggtcca
atgaaatgccaaccgcaatcacgccctgcaagatatgaacccattcatattcatgagatc
cccctcaccctacctccacctctctccaccaactacccttcgcaagaaaaatttatctgc
aaatctgaaaatagcaacaacaacgagcaaagaaatataaaaaaatggcagcaacaattt
aacacgagcaacagcaccaataaaaacaacaacattaacaacaatgatggcaatacatac
gccattaatccagatacgttggatcagcaggtttccttctcatcatcgtcaacgccgtca
tcatcatcatcgctgttgatctcggagttgaagccatcgtcgctgccgttcgcatcttcc
ttcatccagtcgcaacagctgggaaagtccgtcagtgacagggcggccgagcagttcgat
cccaccgtcccaccgccaaatgtcaaaggtcacgtccctagcagctga
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