Helobdella robusta: HELRODRAFT_194539
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Entry
HELRODRAFT_194539 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hro
Helobdella robusta
Pathway
hro03015
mRNA surveillance pathway
hro03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HELRODRAFT_194539
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HELRODRAFT_194539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_194539
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
HELRODRAFT_194539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
20213059
NCBI-ProteinID:
XP_009030771
JGI:
Helro1_194539
UniProt:
T1FW63
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAKESIDGIDLYADVDDFGPDHEYQDSEMFDVMASRHGDPFEDTKYSSQYSRHSSFNGKK
FSLYVANLSWWTTDKDLADAIASLGINDLIDIKFHENRVNGQSKGFATVTVNSEMSSKIL
LDKLSKREIHGQQVVVTHCTAMALKQFDTSAATAATSSASATAAGKKEPASPMYNGQQPL
AAPPSHLSQPQFRLRPPPQPHQQQLQHQQPPHQQQLHSSIINMPTTRPGHPPNLAQGPTP
NHPGPLLGGPGQSPRVLLPSGPNTALPPPALTGMVGGGGGAVRHFGGPSGIAGGLQPSSL
HPPGLTGAGPGLTGMGMAGATGGGPGVAPLTPNVNPIQSPHHPPHHLPPGQLQLRAPPSM
GLRGVVPPSSMELRADHYDPNLFIIINYEGFQQPPPVVVRQSLGQIVLQQQQQQQNQPTD
VLGRQIPLFQQPAVDPFRERNPLGQPILHGTPIITPSPSNSSSSLPLDMYARERAEREQA
EREHIDKDWRQQQQLQQQLQQQQSQFSPQSREQVKTEASSSATQQHQQQQQQLSDMQEFE
DILQRNKSVSSSAISRAVQDASEYASAIETLVTAISLIKQSKIASDDRCKILVSSLQDTL
RGIEDKSYGSKSSRSDHRRSRSPRDRSTTKTSSRHNRSRSRDRDYRESRSSRDKDRYYDK
YDYKDRDYKESARDYKESSSRDYKESSSRDYKDSGRDYKDYKESGRDYKEYKESRSGRH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaaagcatcgatggaatcgatttgtacgccgatgtcgacgattttggacca
gatcatgaatatcaggactcagaaatgtttgatgtaatggcttctcggcatggtgaccca
ttcgaagacacaaagtattcaagtcagtattccaggcactcatcattcaatggtaaaaaa
ttctcactgtatgttgctaacttatcttggtggacgacagataaagatttggccgatgcc
attgccagccttggaatcaatgacctcatagatataaagttccacgagaatagagtcaac
gggcaatccaaaggttttgcaacagtaacagtaaactctgaaatgagttcaaaaattttg
ttggacaaattatcaaaacgtgagattcatggtcagcaagttgtggtcactcattgcacg
gctatggcgctaaagcagtttgatacttcagcggccactgctgccacttcatcagcttcg
gctaccgctgctggcaagaaggagcctgcttcaccaatgtacaacggtcaacagccatta
gcagcgccgccatctcatctatcacagccacaatttcgcctgcgtccaccacctcagccg
caccagcagcaacttcaacatcaacaaccaccccaccaacaacaacttcattcttctatc
atcaacatgccaacaactcgtccgggtcatccacctaatcttgcacaagggcccactcca
aatcatcctggaccattgctagggggcccagggcagtcccctcgtgttcttctgccctct
ggtcccaacacagccttacccccacctgctcttactggaatggttggaggtggtggaggt
gctgttagacattttggtggaccttcaggcatagcagggggtctacaaccctcctctctc
catccacccggattgacaggggccggaccggggctgacaggtatgggcatggctggagca
accggagggggcccaggggtggccccattgacgcccaacgtcaaccctatccagtcaccg
catcacccccctcatcatcttcctcctgggcagttacaattgagagcacctccatcaatg
ggattgagaggtgtagtgccacccagttccatggaattgagagcagatcattatgatcct
aacctattcataattattaattatgaagggtttcaacagcctccaccagttgttgttcgt
cagtcgcttgggcagattgtcctacaacaacaacaacaacaacaaaatcagccgactgat
gtattgggcaggcagattccattgttccagcagccagctgtagatccgttcagggaaaga
aatcccctcggacaacccatcctacacggcactcccatcatcactccatccccttctaat
tcttcttcatctctcccgttggacatgtacgcgagggagagagcagagagagaacaagcg
gagagagagcacattgacaaagattggcgccagcaacagcagctgcaacagcagcttcaa
cagcaacagtcccaatttagtcctcagtccagagagcaagttaaaactgaagccagttcg
tcggccacacaacagcatcaacagcaacaacaacagctgtcagatatgcaagagtttgaa
gatatcttacagaggaataaatctgtatcaagtagtgctatctcaagagccgtgcaagac
gccagtgaatatgcaagtgccatagaaacgttggtgactgcaatctccctcatcaaacag
agtaagattgccagtgatgatagatgcaagatcctcgtgagctctcttcaggacacacta
cgtggcattgaggataaatcctatggatctaagtcatcacggagcgaccaccgtagatct
aggtcgccgagggatcgatccaccacgaagacatcctcccgccacaatcgcagtcgaagc
cgcgatcgcgactacagggagagtcggagcagccgagacaaagacaggtactacgacaag
tacgactacaaggatcgggactacaaagagagtgccagggactacaaggagagtagcagt
agggactacaaagagagtagcagtagggactataaagatagtgggagagattataaggat
tataaagagagtgggagagattataaggagtataaggagagtagatccgggagacactga
DBGET
integrated database retrieval system
