Helobdella robusta: HELRODRAFT_194828
Help
Entry
HELRODRAFT_194828 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_194828
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_194828
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_194828
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELRODRAFT_194828
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HELRODRAFT_194828
mRNA cycle factors
Common to processing body (P body) and stress granule
HELRODRAFT_194828
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
HELRODRAFT_194828
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
HELRODRAFT_194828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
DUF6559
Motif
Other DBs
NCBI-GeneID:
20213160
NCBI-ProteinID:
XP_009010523
JGI:
Helro1_194828
UniProt:
T1FWG5
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MASLDVRGGRQRGGYNNNGTSTLTGRNQPRSAYNANNNVYYPQASFLAYPPQGSANRFAS
GIPNNQQQKLVTMQAPAQQRFMPPQQTPQMNLYNNGNNKFQTMPRPVQPNDFNVGRGGGM
VFNSSNNRGARGGIRGWSADREVPDLIRGGQTSQWNGNMRGPLLNSFNSNNNKPYMNSHL
DNASGDAAYNYHPPYSMPVPARGRGGYVGGRVGLGYHHHHHDSHPYSEGGHFDENKECDP
ADWTKALPRNEKLEHELFGGAHTGINFSKYEDIPVEATGADCPPHIDRFDDIDLGEIIKN
NIKLSQYERPTPIQKYAIPIIVKKRDIMACAQTGSGKTAAFLVPILSQIYANGPCSSASN
GSSRPYKQEKQYPIALVLAPTRELASQIHDEARKFSYRSHVRACIVYGGADINAQMQDLL
KGCHLLVATPGRLVDMIERGKIGMDRVQYLVLDEADRMLDMGFEPQIRRIVEKDTMPATG
VRHTLMFSATFPREIQILARDFLHNYIFLAVGRVGSTSENITQKVLWVEEYEKRVVLLEL
LAASGPNNLILIFVETKQGADQLHAFLSMENFPTNSIHGDRSQRQREEALKAFKTGKTPI
LVATAVAARGLDISNVKHVINFDLPGSIEEYVHRIGRTGRVGNLGLATSFFNEKNRGLAK
DLLELLSEAHQEVPIWLNDMASRNYYGGSSSAAAGAAAGSANKKHSAIKRFNTGFASRDY
RQHHQLQQTTQQPQLARPQPNLATAIQQQQLPLTAAHHPQQQQQQQAHQQAAQAQLPINN
HLLYNQQPTTAYVYGGFHQGYYGNQFQTGQSEWWGHK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttggacgttagaggaggcaggcaaagaggaggttacaacaataatggaaca
tctacattgactggcagaaaccagcccagatctgcatacaatgcaaacaataatgtttac
tatccacaagcctccttcttagcctacccaccacaaggttctgctaataggtttgcatct
ggaatacctaataatcagcagcagaagttagtgacaatgcaggcaccagctcagcagagg
ttcatgccaccccaacagacacctcaaatgaatttgtataacaatggaaacaacaaattt
caaactatgccaagacctgtacaacctaatgattttaatgtcggtcgtggtggaggaatg
gtcttcaacagtagtaacaatcgtggggcaagaggaggtattcgtggatggagtgctgac
agggaggtgcctgatcttataaggggtggtcaaacgagccagtggaatggaaacatgcga
gggcccttgttgaattcattcaatagcaacaacaacaaaccatacatgaactcacacttg
gacaacgcatctggggacgcagcatacaactaccaccccccatacagcatgcccgtgcca
gcaagggggcgaggagggtacgttggcggacgagttggtctggggtaccatcatcatcat
catgacagccacccatacagtgaaggtggacattttgatgagaacaaggaatgcgatccg
gctgactggaccaaggccctgcccaggaatgaaaaattggaacatgaactgtttggagga
gcccacactggcatcaacttcagcaagtacgaggacatccctgttgaagccaccggcgct
gattgccctccccacatcgacaggtttgatgacatcgacttgggcgagataatcaagaac
aacataaagttaagtcagtacgaaagaccaacacccatacagaagtatgccattcccatc
attgtcaagaagagagacatcatggcttgcgctcagacaggttctggcaagacggcagcc
ttccttgttccaatcttgagtcagatctatgctaatggaccgtgcagcagtgcttctaat
ggctcttctcgaccgtacaagcaggagaagcagtacccaattgcattggtcctggcccct
acaagagagctggcgagtcagattcatgatgaggccaggaagttctcctatcgttcgcac
gttcgtgcgtgcatcgtttacggaggagcagatatcaatgcacagatgcaggatctactc
aagggatgtcacttgttggtagctacccccggtagattggtcgacatgattgagagagga
aagattggcatggatagagtccaatacctagtgctggatgaggcagatcgcatgctggat
atggggttcgaaccgcagatccgtcgaattgtcgagaaggacacaatgcccgccacagga
gttcgacacacactcatgttcagtgccacattccccagagaaattcagattcttgctcgt
gacttcttgcacaattacatcttccttgctgttggcagagttggtagtaccagtgagaac
atcacacagaaggtgttgtgggttgaagaatatgagaagagggtcgtcctcctggaactt
cttgctgcttcaggtccaaacaacttgatcctgatatttgtggaaaccaaacaaggagct
gaccagttgcatgcttttctctccatggagaactttccaaccaactcgatacatggagac
agatcacagaggcagagggaagaagcattgaaagcattcaagactggcaagactcctatt
cttgttgctactgcagtcgccgctcgtggattggacatcagcaatgtgaagcatgtcatc
aattttgacctgcctggttccattgaggaatatgtccacaggattggaaggaccggaaga
gtcggaaatttgggactggcaacaagcttctttaatgagaagaatcgaggcctggcgaag
gatctgctggagctgctgtcagaggctcaccaggaagttccgatctggttgaacgacatg
gccagcaggaactattacggagggtcctcttcagcggctgccggtgctgctgctggcagt
gctaacaagaagcacagtgctatcaagaggttcaatacagggtttgcctctcgagactac
aggcagcatcatcaacttcaacaaacaacgcagcaaccgcaacttgctcgtccacagccc
aacttggccactgccatccagcagcagcagctaccgctcacagctgcacatcatccgcaa
caacaacaacaacagcaggcgcaccaacaagcagcgcaagcacaactgccaatcaacaac
catctcctctacaaccaacaaccgactactgcctacgtctatggaggtttccaccagggt
tactatggcaaccagtttcagactggtcagtcagagtggtggggccacaagtag
DBGET
integrated database retrieval system
