Helobdella robusta: HELRODRAFT_62194
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Entry
HELRODRAFT_62194 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_62194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_62194
Spliceosome [BR:
hro03041
]
Common components
Common spliceosomal components
SR proteins
HELRODRAFT_62194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Smg4_UPF3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
20213316
NCBI-ProteinID:
XP_009008916
JGI:
Helro1_62194
UniProt:
T1FWW8
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MSNRIYIGRISSRTSERDIEKFFKGFGRIRFMSLKNGYGFVDLEDERDADDAVYELHGKE
LLGERVIVEHAKGPARRSSFGRSAPPPQRFPRGPRPTWLDKYGAPVRTGYKLIVENLSSR
VSWQDLKDYMRQAGDVTFADAHKGEKNVGVVEFASYADMKKAKEKLDGTEINGRKIKLIE
DVNNAPRLAKSLCIVMIMIITLVQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagaatttatattggaagaataagcagtagaaccagcgaaagagacattgaa
aaatttttcaagggtttcggcagaattcgcttcatgtcattgaaaaatggctatggcttc
gtggacctagaagatgagagggatgctgatgatgctgtatatgaattacacggaaaggaa
ttgttaggtgaaagggtcatagttgaacatgctaaaggtcctgcaagaaggtcatcattt
ggcagaagtgcacctccaccacagagatttccaagaggaccgaggccaacctggctagac
aagtacggtgctcctgttaggacaggttacaaattgatagttgaaaacttgtcgtcaaga
gtcagctggcaggatcttaaagattatatgaggcaagctggtgatgtaacttttgctgat
gctcacaagggagagaaaaatgttggtgttgttgaattcgcgtcatatgctgatatgaaa
aaagctaaagaaaagttggatggtactgaaatcaatgggagaaaaataaaactgatagaa
gatgtcaacaatgctcccaggttagccaagtctttgtgtatagtgatgataatgataata
accttagtacaataa
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