Helobdella robusta: HELRODRAFT_63203
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Entry
HELRODRAFT_63203 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_63203
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_63203
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
90S particles
Other 90S particles
HELRODRAFT_63203
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
HELRODRAFT_63203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
eIF2A
ANAPC4_WD40
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
20213470
NCBI-ProteinID:
XP_009009044
JGI:
Helro1_63203
UniProt:
T1FXC2
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MKVKMLSRNLEDALRETKKDIHKVPRNYKQSLHPFEVTREYTRVLNAVKLERVFAKPFLG
SFDEHRDGISCLSKHPQHLSTAYSGSCDGEIRIWNIGERKCLKSLTAHVGFVRGICFNTK
SETMLSCGDDKVIKQWSLADLFENQADDPAVTIIGKTLYTGMDHHRKQDVFSTCGQQIDV
WDEEKVEPVRTYKDNNTSVSIKFNQSETNYLLSTLTDRSVALFDIRHPFVIRKVVMKMNS
NAAVWNPLKPLFFTAANEDYNLYTFDMRKMNVPVVIHKDHISAVMDLDFSPTGEEFVSGS
YDKTIRIFPSKGGHSRDVYHTKRMQRVSCVKWSLDSRFIYSASDDMVIRVWKANASEKLG
VLKPREKEAFCYSQALKNKFAQHPQVKRIARHRHVPRHVYTAAQEHRIIHDSLKRKETNK
RLHSKPGTVPFISEKNKKIVSEIQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaagatgttatctcgtaatttggaggatgctttgagggaaactaaaaaagac
attcataaagttcccaggaattacaaacaatctttgcatccttttgaagttacacgagaa
tataccagagttctcaatgccgtcaaattggaaagggtttttgctaaaccttttttaggt
tcctttgacgaacacagagatggcatcagctgcctctccaaacacccacaacatctttca
actgcatattctggtagctgtgatggtgaaattagaatctggaatattggtgaaagaaaa
tgtttgaaatctctgacagctcacgtgggttttgtgagaggaatctgcttcaatacaaaa
tcagaaactatgttatcgtgtggggacgataaagtcattaagcaatggtcgctggcagat
ctttttgaaaatcaagcagatgatcctgcagtcactatcatcggcaagacattatacact
ggcatggatcaccacagaaagcaggacgtgttctcaacatgtggacaacaaatagacgtc
tgggatgaggagaaagttgaaccagtacgaacgtacaaggacaacaacacttccgtttcc
attaaattcaaccaatcagaaacaaactacctactttcaacgttgacggacagaagtgtg
gcactgtttgacatcaggcacccgtttgtcataaggaaggttgtcatgaagatgaacagc
aatgcagccgtatggaatccgttgaaacctttgtttttcaccgcagccaatgaagattac
aacttgtacacatttgatatgaggaaaatgaacgtgcctgtggtcattcacaaagatcac
atctctgcagtgatggatttggatttttcaccgaccggtgaagagtttgtatcaggcagt
tacgacaaaaccatcagaatctttccgtcgaaggggggacacagcagagatgtctaccac
acgaagagaatgcagagggtttcctgcgtcaagtggtcactggacagtcgcttcatttat
tctgcctctgatgatatggtcatcagggtttggaaagctaatgcttcagaaaagctcgga
gtgctaaagccgagggaaaaagaagctttttgttattcgcaagctctaaagaacaagttt
gcccaacatccacaagttaaaaggatagcgagacatcggcacgtacctcgccacgtgtac
acagcagctcaggaacacagaatcattcacgattcactgaagagaaaggagaccaacaaa
agactacacagcaaaccaggaacagttccttttatatcagaaaagaacaaaaaaattgtt
tcagaaatacagtaa
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