Helobdella robusta: HELRODRAFT_63211
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Entry
HELRODRAFT_63211 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_63211
Enzymes [BR:
hro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HELRODRAFT_63211
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HELRODRAFT_63211
Prokaryotic type
HELRODRAFT_63211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
DUF1308
Motif
Other DBs
NCBI-GeneID:
20213472
NCBI-ProteinID:
XP_009008791
JGI:
Helro1_63211
UniProt:
T1FXC4
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
RYSDFIVHEINLDGNVVHLTNISFKEDAEVDEDGACLFTEEQLDVLKRLSGSPKESTEKF
IVQVKDDKEVRTKMHNYIRNHFPKLSSETTSMNNEKNIIVTVGGNKRDNSKNHFRDYCKF
VLYKENKSTMEAIQYISTILRVNHSLFSFAGTKDKRAITTQEVTAYGVHPRKLAGLNKCL
KNVTLGDFRTSKTPLKLGDLKGNHFEIIIRNLDGANVCIENSLSMLKRNGFINYFGMQRF
GATEVCNSRVGKCLIQSDWITAIELILKPRNEENDLIMECRKTWHETHDPSKALQALKNF
SCIERKLLEGLCRHTPKNSVAALSYIPRNMRLMYLHAYQSLIWNKIVSKRFQTLKSEVLI
GDLFQSSDDKSVSVVSEENIGYVKLTDVVLPLPGFDVKYPDNEIKIWYDELLSSDGLHVN
SFNHKIRDYSLSGSYRKIIVIPDVCNWRILNYQNAENSLIITDKDVMEGFSSSVENEGVN
KALKLELSLPASSYATMAIREITKQDTSSANQTLLTRNLDEFNK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
aggtattcagattttattgttcatgaaattaatttggatgggaatgttgttcacctgact
aatatttcatttaaagaagatgcagaggtcgatgaagatggggcttgtttgttcacagag
gaacaattggacgttctcaaacgtttatcagggtctcctaaggaatcaactgaaaaattt
attgttcaagtaaaagatgacaaagaagttcgaacaaagatgcataattatataagaaat
cattttcctaaattatccagtgaaacaacatcaatgaataatgaaaaaaacattattgtc
actgttgggggaaataaaagagataactccaaaaatcattttagagattattgcaagttt
gttctgtacaaagagaataagagtactatggaagccattcagtacatatcaactatcttg
agagtgaatcattctttattttcttttgctgggaccaaggacaagagagcaataacaact
caagaagttacagcttacggagttcatcctagaaaacttgctggactcaacaaatgtttg
aagaatgttacacttggagattttagaacctccaaaacgccattgaaattgggggatttg
aaagggaatcattttgaaataattattagaaatcttgatggtgcgaatgtatgcattgaa
aactcattgtcaatgttgaagcgcaatggtttcatcaactactttggcatgcaacggttt
ggagcaacagaagtatgcaattctcgtgttggaaaatgtttaatacaaagtgattggatc
acagcaattgaactaattttaaaaccacgcaatgaagaaaatgatttgataatggaatgc
aggaaaacgtggcacgaaacccacgacccttcaaaagccttacaagctcttaaaaacttt
tcatgtattgaaaggaaacttctcgaaggtttatgcagacacactccaaaaaattctgtt
gcagctttgtcatatattccaagaaacatgaggctgatgtatctacatgcctatcaaagt
ctcatatggaataaaattgtttcaaaaagatttcagacgctcaaatcagaagttctgatt
ggcgatttgtttcaatcttctgatgacaaatccgtttctgtggtgtcagaagaaaacatt
ggttacgtcaaattaacagacgtcgtcttgccgcttcctggtttcgatgtgaaatatcct
gataacgaaattaaaatttggtacgatgaacttctttcttccgatggtcttcacgtcaat
agtttcaaccataaaatcagagattattcgctatctgggagttaccgaaagataatcgta
attcccgacgtttgcaactggcgcattctaaattaccaaaatgcggagaattcgctaata
attacggataaagatgtaatggaaggattctctagttccgttgagaacgaaggtgttaac
aaagctttaaagctcgagttgagtttgccagcgtcatcttatgcaacgatggcaattaga
gaaataactaaacaagacacttcttctgctaatcagactcttctaactagaaatttggat
gaatttaataaatga
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