Helobdella robusta: HELRODRAFT_64273
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Entry
HELRODRAFT_64273 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_64273
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELRODRAFT_64273
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
90S particles
Helicases
HELRODRAFT_64273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
PQQ_3
T2SSE
SAM_LFY
Motif
Other DBs
NCBI-GeneID:
20213620
NCBI-ProteinID:
XP_009015335
JGI:
Helro1_64273
UniProt:
T1FXS2
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
QVNHFRNEKHIHVYGTDMPDPIESFDQLFKSYQIDKNYMENLTNMGFKVPTPVQMQAITA
ILHAKVMVCAPTGSGKTLAFGLPILHKLGEHKTGGFRALILAPTRELAKQIQSEIVQVSK
GSSLKVRYLLSSKTVENRKKWMNAGYFIVGKFNMVITTPKKFVYVLKKFRSELSLKSVEW
LVVDESDKLYEDGDMGFRQQLGNIYKACQSSALRTLLFSATFSKEVELWCQLNLDNLLRI
YIGNINAATDTVDQHLVYTGSEDGKIYALRNIFKEYQPPVLVFVQSKQRADELFVELLGD
GMNVQAIHSDKSDVQRDGIMKNFLNGSVHILICSDVMARGLDFKNVNLVINYDFPTSAVA
YIHRIGRTGRAGRPGKAVTFFTDDDVRYLRSIVNVIRQAGCEVPEYMLRIQKPPRYFFSS
FPFLSNVFVSTK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
caggtcaatcacttcagaaacgaaaagcacatacatgtatatggcacagacatgcctgat
ccgatagaatcttttgatcagctatttaaaagttatcaaatagacaagaattatatggaa
aatttaactaatatgggttttaaagtccctaccccagtacaaatgcaggctatcactgcc
atcttgcatgcaaaagtaatggtctgtgctcctactggatcaggtaagactttagcattt
ggtctgcctattttacataaattaggtgagcacaaaactggcggcttcagagctctcatt
ttggctccaactagagaattagcgaaacagattcagtcagaaattgtgcaggttagcaag
gggtcttcattgaaagttaggtacctcctaagttcaaaaacagtggaaaatagaaagaaa
tggatgaatgcaggttatttcattgtggggaagtttaatatggttatcacaacgccgaaa
aaatttgtttatgttttgaagaaatttaggagtgaactttctcttaagagtgttgaatgg
ttagttgtagacgagtcagacaagttatacgaagatggtgatatgggctttagacaacag
ttgggaaatatctacaaggcttgccagagctctgctttaaggacattactgttcagtgct
accttctcaaaagaagttgaactgtggtgccagttaaatttggacaatctattgagaatc
tatattggaaatataaatgcagctactgacacagttgatcaacatttggtgtatactggc
agtgaagatgggaagatatacgcactgaggaatattttcaaagaatatcagcctcctgtg
ttggtttttgtccaatcgaagcagcgagccgatgagttgttcgtagaacttcttggagat
ggaatgaatgtgcaagccattcattcagataaatctgacgtccaaagagatggcataatg
aaaaattttctaaacggaagcgtacacatcctcatctgttctgacgtcatggccaggggg
ttggactttaaaaatgtcaatctcgtcatcaactacgacttcccgactagcgccgttgct
tatatacatagaatcggtcgtacaggtagagcgggtaggccaggtaaagcagttacattc
ttcacagatgatgacgttcgctatcttcgaagtatcgttaacgtgatcagacaagctgga
tgtgaggttcccgaatacatgctgagaatacagaagccacctaggtactttttttctagc
tttccctttctttcgaatgtttttgtttctacaaaataa
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