Helobdella robusta: HELRODRAFT_65501
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Entry
HELRODRAFT_65501 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K18752
transportin-1
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_65501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_65501
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_65501
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HELRODRAFT_65501
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
HELRODRAFT_65501
Pre-60S particles
HELRODRAFT_65501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
Arm
TOR1L1_N
TPR_IMB1
HEAT_2
TPR_IPO5
IBN_N
Cnd1
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_GCN1_C
PDS5
VPS15-like_hel
HEAT_MROH2B_1st
INTS7_N
SCD
Dopey_N
Motif
Other DBs
NCBI-GeneID:
20213787
NCBI-ProteinID:
XP_009019580
JGI:
Helro1_65501
UniProt:
T1FY89
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MAGNVWHPEDVGLQQILQLLRESQSPDNSTQRTVQQKLEELNTYPDFNNYLIYVLTKLTS
EDEPTRSLSGLILKNNIRTHYEKFPIPVTTFIKQECLGSIGDPSPLIRATIGILVTTIVA
KGGLENWPDLLPCLCQCLDSEDYNVCEGAFGALQKICEDSAELLDSEVLNKPLNVLIPKF
LQFFKHNSPKIRSHAIACVNQFIIGRTEALMYHIDSFIENLFFLSTDDDPEVRKNVCRAL
VMLVEVRMDRLIPHITSLVEYMLIRTQDPDGSVALEACEFWLSLAEQPICKEVLVGHISR
LVPVLIKGMKYSEIDIILLKGDVEDDETVPDKECDIKPRFHRSRRHSLGKFGEEEGDDDD
DSLDDDALSDWNLRKCSAAALDVLANVFHDDILPIVLPILKDLLFHQDWELKESGILVLG
AIAEGCMSGMVVHLPELVPYLVTCLSEKKSLVRSITCWTLSRYAHWVVGQPHELYLKPLM
TELLKRILDANKRVQEAACSAFATLEEEACTELVPYLGFILETLVYAFRKYQHKNLLILY
DAIGTLADSVGHHLNKPEYISLLMPPLIDKWNMLKDTDKDLFPLLECLSSVATALQSGFL
PYCEPVFRRCVSLIEQTLNQHYAHQRNPDQFEAPDKDFMIVALDLLSGLAEGLEQHIEGL
ASSSSLLKLLYQCMQDSLPEVRQSSFALLGDLTKACYSHVKPFIGEIMPILGNNLNPEFI
SVCNNATWAIGEISIKTGEEMRPYIPLVLDRLIAIINRPNTTKTLLENTAITIGRLGLVC
PDVVAPALQQFIRPWCSSLRNIRDNDEKDSSFRGVCAMINLNPSGVVQDFIFFCDAVASW
VNPKEDMKEMFFKILHGFKNQVGDENWKRFSDQFPPPLRERLATHYGV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaacgtttggcatcccgaagacgtaggattacaacaaatactccaattgttg
agggaatctcaatccccagacaacagcactcaacgaactgttcaacagaaattagaagaa
ttgaatacttatcctgatttcaacaattatttgatctatgtattgactaaactaactagt
gaagacgagcctactagatcactcagcggtttgatattgaaaaacaacattagaactcat
tatgaaaagtttcccataccggtaacgacctttatcaaacaagaatgtttaggcagtatt
ggagatccatctcctctgatcagggcaacaattggcatattagttactacaatcgtagca
aagggaggcctagaaaattggccagatcttttgccatgcttgtgtcaatgtttagattca
gaggactataatgtctgtgaaggtgcctttggtgccttgcaaaaaatttgtgaagactct
gctgaattgttagacagtgaggtattaaacaagccgttgaatgttcttataccaaaattt
ttgcaattcttcaaacacaacagtcctaaaataaggtcgcatgccatagcttgtgttaat
cagtttatcattggtagaacagaagctttgatgtaccatattgatagcttcattgagaat
ctgtttttcctatcaactgatgacgatcctgaggtgaggaagaatgtttgtcgtgcattg
gtcatgctggtggaggtacgaatggaccgactaattccacacatcacgagccttgtggag
tacatgctgataaggactcaagatcctgatggctcagttgctctggaggcgtgtgagttc
tggctctcattagcagaacaaccaatctgcaaggaagtacttgtcggccatatatcaagg
ctagtgccagtccttattaagggcatgaagtactctgaaatcgacatcatcctactgaag
ggagatgttgaggatgacgagaccgtaccagacaaggaatgtgacatcaaaccaagattc
catcgatcgagacgacacagtcttggaaagtttggagaggaggaaggtgatgacgatgat
gattcattagatgacgatgccctctcagattggaatttaagaaagtgctcagctgcagcc
ttggatgttctggctaatgtatttcatgatgatatccttccaattgtcttgcccattctc
aaagatctgctctttcaccaggattgggagttgaaggaatcaggcatattggtgttggga
gctattgcagaaggatgcatgagtgggatggtggtgcatttacctgagctggtgccatat
ttggtgacctgtttatcggagaagaaatctctcgtaagatcaataacatgctggacattg
agtagatatgcacactgggtagttggccagccacatgagctctatctgaaaccactgatg
actgagctgttgaaacgtattttggatgcgaacaagagggttcaagaagctgcatgttca
gcatttgccacattagaggaggaagcctgtactgaacttgttccttatctcggctttatc
ctagagacacttgtctatgcttttcgcaagtaccagcacaagaatttattgattttatat
gatgccattgggacattagctgattctgttggtcatcatctcaataaaccagagtacata
agtctgctcatgcctccacttattgacaaatggaatatgctcaaagatactgataaggat
ctttttccacttcttgagtgtctttcaagtgtggcaactgcattgcaatctggatttctt
ccttattgtgagccagtctttagaagatgcgtttctctcatcgaacagactctcaaccag
cattatgcccatcaaagaaatcccgatcagtttgaggctcctgataaggatttcatgata
gttgcattggacttactgagtggtcttgccgagggcttggagcagcacatcgaaggcctg
gcatcaagtagtagcttgctcaagttgttgtaccaatgcatgcaggattccttacctgaa
gttcgtcaaagttcgtttgctcttcttggagatcttacaaaggcatgctattctcatgtt
aaaccgttcataggtgaaattatgcctatattaggcaataatctcaaccctgaattcata
tcagtttgcaataatgccacctgggctattggcgagatatctataaaaactggtgaggag
atgaggccttacataccacttgtcctggatagactgatcgctatcatcaacagacctaac
actacaaaaacgcttcttgaaaatactgccataacaataggtcggctcggccttgtctgt
cccgatgttgtcgctcctgcccttcaacaattcatcaggccatggtgcagttcattaagg
aatataagggataatgatgagaaagattcatcatttcgaggagtttgtgccatgatcaac
ttgaatccgtcgggagttgtacaggatttcatctttttctgcgatgcagttgcctcttgg
gtcaatccaaaagaggacatgaaggagatgtttttcaagatactgcatgggttcaaaaat
caagttggtgatgaaaattggaagagattttcagatcagtttccacctccattgagagaa
cgactggccacgcattatggagtgtaa
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integrated database retrieval system
