KEGG   Helobdella robusta: HELRODRAFT_65956
Entry
HELRODRAFT_65956  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
hro  Helobdella robusta
Brite
KEGG Orthology (KO) [BR:hro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hro04121]
    HELRODRAFT_65956
Ubiquitin system [BR:hro04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     HELRODRAFT_65956
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_RIG_2nd TPR_17 TPR_19 Beta-prop_WDR19_1st TPR_2 TPR_1 Beta-prop_IFT140_1st TPR_6
Other DBs
NCBI-GeneID: 20213848
NCBI-ProteinID: XP_009019964
JGI: Helro1_65956
UniProt: T1FYF0
LinkDB
Position
Unknown
AA seq 648 aa
FQRSQHVTSELIKRLGLEYELEGHQGCVNCLSWNENGRLLASGSDDVQVIIWDALRHKRL
TSLRSGHRGNIFSVKFLPHTNDNVVISGAADCEIRVHDVTTKDPIHVISCHQNRVKRLVV
TPDQSNVFWSAAEDGTVMQFDIRDPSSLKSEHPQCLLIDLKAQIGYYTEVKCLAINPAFS
ELLAVGANDPYVRMFDRRMLRCRSVTRDRSSSKNGDDDDEIPLGCVSYYVAGHLPEKEVE
FRKRHRTLASTYVAFSPNGQELLVNLGGEQIYLFNIFEKRWKQKIDCLFKRNDKYSSEFQ
NDENGYLKGGWVFFNNMNNNNNLYSAICDRAFCSLQNKLLEDMKEMAKNSFNLKNYNKAV
HIYNNAISQYPNISTLYCNRAMALSKRNWNGDSYAAMRDSCTAIRLDDQNLKAHFRLVKC
LINLKWLDEASRCLLMTKMKFPNSQALLTLEKEIESAINNKKILDNTMYSRSSNLEKLSE
NEKICRSKAYDYEQRFCGHCNTTTDIKEANYFGSDGQYIVAGSDDGSFFIWDRKTTNIVR
ILRGDDSIVNCLEPHPTTCLLATSGIEPVVRLWSPMPADGYENKREIDDSDDAAQANQQR
MNKDPIELMLLNMGYTLNAADLEGRGEAGGASGGSGSDSDAAMMCRTS
NT seq 1947 nt   +upstreamnt  +downstreamnt
tttcagaggtcccaacatgtaacgtcagagcttattaagagactcgggcttgagtatgaa
cttgagggacatcaaggatgtgttaattgcttgtcatggaatgaaaatggccgattgtta
gccagtggatcagacgacgtacaggtgataatctgggacgccctcagacataagaggctc
acctctttgaggtcgggtcatcggggtaacattttttcagtcaagttcctcccacacacg
aacgacaacgtcgtcatcagcggtgcggctgactgcgagataagagtgcatgacgtcaca
accaaagatcccatacacgtaatctcttgccaccagaaccgagtgaaacgattggtcgtc
actccagaccaatcaaatgtcttctggagtgctgctgaagatggcactgttatgcagttc
gacatccgagatccatcgtctctgaaaagtgaacatccacagtgcttgctgatcgatcta
aaggcacagattggttactacacggaagtgaagtgtctggcgatcaatccggcgtttagt
gaactgctggccgtcggcgctaacgatccttacgttcgaatgtttgataggagaatgctg
agatgtagatctgtcactagagatagatcatcgtcaaaaaacggtgatgatgacgatgaa
attccacttggttgcgtcagttattatgttgcaggccatctcccggaaaaagaagtcgaa
ttccggaaacgccaccgaacgctggcctcaacgtacgtagctttcagtccgaacggccag
gagctgctggtgaacttgggcggggagcaaatttacttgttcaacattttcgagaaaaga
tggaagcagaagatagactgcctcttcaagagaaatgataaatattcatctgaatttcaa
aacgatgaaaatggctatctaaaaggtggttgggtattttttaataatatgaataataat
aataatttatatagcgcaatatgcgacagagctttttgttctttacagaacaaactccta
gaagatatgaaagaaatggccaagaacagcttcaacttgaagaattacaataaggcagtg
cacatatacaacaatgccattagccagtaccccaatatatctacactctactgcaatagg
gctatggccttatcaaaaagaaattggaatggcgattcgtatgcagctatgagggacagc
tgtactgctatacgattggatgatcaaaatttgaaagctcacttccgattggtcaaatgt
ttgataaaccttaaatggttggacgaagcgagtagatgtttactgatgacgaaaatgaaa
ttcccaaactcccaggctctgctaactttggaaaaagaaattgaaagtgctataaataac
aaaaaaattttagataacacgatgtactcacgcagttcaaacctcgagaagttgtcggag
aacgagaagatctgtcgcagcaaggcttacgattatgagcagcgattttgtggtcattgc
aacacgactactgatatcaaggaggctaattattttgggagtgacggccagtacatagtt
gcaggatcagacgacggatcattcttcatatgggatcgcaaaacgacgaacattgtcagg
atcctgagaggtgatgactcgattgtcaactgcctagaacctcaccccaccacatgccta
ctggccaccagtggcatcgaacccgtcgtcaggctctggagccccatgcccgcggacggt
tacgagaacaaacgagagatcgacgattcagacgacgcagctcaagcaaatcagcagagg
atgaataaggaccccatagaactgatgcttctaaacatgggctacaccctcaatgcggcc
gaccttgagggcaggggtgaggctggcggggcttccggtggctcagggtcagatagtgac
gctgctatgatgtgtagaactagttga

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