Helobdella robusta: HELRODRAFT_66349
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Entry
HELRODRAFT_66349 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hro04040
]
HELRODRAFT_66349
Ion channels [BR:
hro04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
HELRODRAFT_66349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Mucin
DUF4834
DUF6377
Motif
Other DBs
NCBI-GeneID:
20213898
NCBI-ProteinID:
XP_009019247
JGI:
Helro1_66349
UniProt:
T1FYK0
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
WFETISMLVILLNCLTLGLYKPCIDENCLDDLRCRILKYSDHLIFAFFASEMMIKLMAMG
FIGRLAYLAETWNRLDMFIVVAGLVDWLAGWLAGWLNLNLSAIRTIRVLRPLRAINRVPN
LRILVNLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWSGVLRNRCWLRLPENSGWNTNET
ILFFHSFLSPYYMDHDKDFICSREDDNGMNRCEHLPLYILNGMRCNASASPSHYADATTV
DASLHNNESCINWNMYYTACQPTGLNPFQGAISFDNIGLAWVAIFQVISLAGWVNIMYYI
QDAHSFWNWIYFVALIVVGAFFMINLCLVVIATQFSETKKREMERMQYERRNQRQRQSTS
TVRSLTESRGCYDELIRCFAQFLTYLANKISGLWKTFRRKCSQHHVIQNLNRNKCCIVCS
FFADKGNFKMTKACNKEEDGDDYFSNAEEQPVCTVFESKSENRVKNSKIYKQKNYVTGKR
GCSNKSTNLKYDAGEGDSSAASSSRDCRLASSDEVDGNVRSVIWKKLRRYVKVLVNQRYF
QQGILVAILINTLSMGIEHHNEPKLLTEVLEYSNVIFTGLFAVEMFLKLISEGLIGYIRN
GFNVFDGFIVVISLVELTHEGDSGLSVLRTFRLLRILKVVRFLPALRQQLVIMLKTMDNV
ATFFALLVLFIFIFSILGMHLFGGRLCAHPSEKRPCNCTEVLANICKCDRKNFDSLLWAI
VTVFQILTQEDWNEVLYNGMSKTSAWAALYFIFLMTFGNYVLFNLLVAILVEGFSSSEKQ
QQQQIKHHLLLKPITVEDTQTGDLQLISTTTKPKKNDNKFVAGRRTFKRASVQLDVTKLD
ENNLHRTRKLSIPANQLLLTSSALARSKHVNTSISSASPTTFLPFIIRTLAVTPTSKTTA
NTTSLTTMASTTTTATTTATTTATSTTAISTTTSTATTATAVNKQTIRSVRRVSLIYPTN
NTPLNRLRQGCLRLVTWYAFDYIVLLVIALNCITLAMERPDVPNDSKERQFLIISNYLFT
ALFGFEMAVKVIAQGFMLGEGSYLKSGWNVMDACLMFISITDIIFSLTASHSPKIFGILR
VFRLLRTLRPLRVISRAPGLKLVVQTLLSSLRPIGNIVFICCTFFIIFGILGVQLFKGML
YHCEGGDVSMVTNKTDCTRKGPPFKWTNRKYNFDNLGQALMSLFVLASKDGWVNIMYTGL
DAVGVNKQPIVNYNEWRLLYFISFLLLVAFFVLNMFVGVVVENFHKCRESQEQEERQRRM
SKKAMKMLKKRQTQTSSPTHEQTGQCEIPYWTNYSKWRMSLHSIVTSKYFDLAIAGVIGF
NVISMAMEFYMMPKELEQTLKIFNFFFTSIFVLEAGVKVVSYGAFRYLSDRWNQLDVSII
IMSIAGIILEEVTSQNFPITPTIIRVMRVLRIARVLKLLKMAKSVRALLDTVVQALPEVA
NLGLLFFLLFFIFAALGVELFGRVECSDQFPCEGLGRHAHFKNFGMAFLTLFRIATGDNW
NGIMKDTLREECDSSEDCVRNCCVNKIIAPIFFVVFVLMAQFVLVNVVVAVLMKHLEVIR
MFQFTVHVHDAEIVLQKLIIN
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
tggtttgagacgataagcatgctggtcatcctgctgaactgcctgacgctgggcctctac
aagccgtgcatcgatgagaactgcctggatgatttgagatgtcgcattttgaagtactct
gaccacctgatatttgccttcttcgcttcggagatgatgatcaagttgatggccatggga
ttcattggcaggctggcctacctcgctgaaacatggaacaggcttgatatgttcatcgtt
gttgcagggttggttgattggttggctggctggttggctggttggttgaacttgaacctc
tccgccatcagaaccatcagagtcctcagaccactcagagctatcaacagagttccaaat
ctccgcattttggtgaacctgcttttggacacactgccgatgcttggaaatgttttgttg
ctatgtttttttgtgttcttcatttttggaatcgttggagttcaactttggtcgggcgtt
ttgaggaacagatgttggttgaggctgcccgaaaactcagggtggaacaccaatgaaaca
attttatttttccacagcttcctcagtccctactatatggaccacgacaaagacttcata
tgcagccgggaagatgacaacggcatgaacaggtgcgaacatcttccgctctacattctg
aacggaatgagatgcaacgcatcagccagcccatcacattacgccgacgcaaccacagtc
gatgccagcctccacaacaacgagagttgcatcaactggaacatgtactacacggcctgc
caaccaactggacttaatccctttcaaggtgctatctcttttgacaacatcggtcttgct
tgggttgcaatttttcaggtcattagtttggccggttgggtgaacatcatgtattacatt
caagacgcccattcgttctggaattggatctattttgtggctttgattgttgtcggagca
ttttttatgatcaatctctgccttgtagttattgcaactcaattttcagaaacaaaaaaa
cgggaaatggagcggatgcagtacgaaagaaggaaccaacgacaaaggcagtcgaccagc
acggtgaggagtctgacggaatcgcgaggatgctacgacgagttgattagatgtttcgcc
caatttcttacctacctggctaataaaatatccggtctatggaaaacgtttcgccggaag
tgctcacaacatcacgtgatacaaaatttgaacagaaacaagtgctgcatcgtatgcagc
ttttttgcagacaaaggcaattttaaaatgacaaaagcctgcaataaagaagaagatggt
gatgattacttcagcaatgccgaagaacagcctgtctgtacagtgtttgaatctaaatca
gaaaatcgagtaaaaaacagtaaaatatataaacaaaaaaactatgtaacgggaaagaga
ggctgcagcaataagagcactaatttgaaatacgatgctggagaaggagattcgtctgct
gccagttcttcaagagattgtaggctggcgtcctccgatgaggtcgatggtaacgtcaga
agtgttatatggaagaagcttcgacgttacgtgaaagttttggtgaatcagcgatatttt
cagcaaggcattctggtcgccatattaataaacacgctcagtatgggcattgaacaccac
aatgaaccgaaattgttaactgaagttttggagtacagcaacgttatattcaccgggttg
tttgctgtggagatgttcctgaagttgatctcagagggcttgatcggctacatcaggaat
ggcttcaacgtctttgacggtttcattgttgttattagcttggtggagttgacccacgag
ggggacagtgggctgtcggttctgagaacgttcaggttgttgaggatcttgaaagtcgtc
aggttccttccagcactgcgtcaacagctggtcattatgctgaagaccatggacaacgtt
gcaacatttttcgcgctccttgtactcttcatcttcatattcagcattctgggaatgcac
ttgtttggtggcaggttgtgcgcccaccccagcgagaagagaccgtgcaactgcaccgag
gtcctcgccaacatctgcaaatgtgacaggaagaattttgactcattgctctgggctatt
gtgactgtttttcagatactaacacaggaagattggaacgaggttctgtacaacggaatg
tcgaaaacatcagcctgggcagctctgtacttcatcttcctcatgacgtttggcaactac
gtcctcttcaacctcttggtggccattcttgtggaaggattttcatcctcagagaaacaa
caacaacaacagataaaacatcaccttctcttgaaaccaataacagtagaagacactcag
acaggagacctgcagttaatcagcacaacaacgaaaccgaagaagaatgataacaaattt
gtggctggcagacggaccttcaaacgtgcgagtgtacaactggatgtgacgaaactggac
gagaacaatttgcatcgtaccaggaaactttccataccggccaatcagttgctgctcaca
tcatccgcacttgctagaagcaagcacgttaacacatccatctcgtcagcatcgccaact
acatttttgccatttattattagaacgttagcagtcaccccaacatcaaaaactaccgca
aacactacatccctaacaacaatggcatccacaacaacaacagcaacaacaacagcaaca
acaacagcaacatcaacaacagcaatatcaacaacaacatcaacagcaacaacagcaact
gcagtaaacaagcaaacgatcagaagtgttaggagggtctcattaatttatccaactaac
aacactccactcaacagattacgacaaggatgtttacgattggtcacgtggtacgcattt
gattacattgtcctactcgtcatcgccctcaactgcatcaccctggccatggaacgaccg
gacgtccctaacgacagcaaggagaggcagttccttatcatctcaaattatttgttcaca
gctctgttcggctttgaaatggcagtgaaggtgatagcgcagggtttcatgttgggtgaa
ggcagctacctgaagagtgggtggaatgtgatggacgcctgtctcatgttcatctccatc
actgacatcatcttctcactcaccgcatcacacagtccaaagatcttcggcattttgagg
gtcttcagactgctcagaacgttgcgaccactcagagtgatcagtagagcgccaggtctg
aagctggtggttcaaaccctgctatcctccttgagacctatcggcaacatcgtcttcatc
tgctgcaccttcttcatcatatttggcattcttggagttcaactcttcaaaggcatgctg
taccactgcgagggcggggacgtttccatggtgaccaataaaacagactgcacgaggaag
ggaccccctttcaagtggacgaaccgcaagtacaacttcgacaacttgggacaggcttta
atgtctttgtttgtgttggcatcgaaggacgggtgggtgaacatcatgtacaccggcctg
gatgcagttggagtgaacaaacagcccatagtgaactacaacgagtggaggctgctgtac
ttcatctctttcctcctcctcgtggcgttcttcgtcctcaacatgttcgtcggagtcgtc
gtagaaaacttccacaagtgtcgggagagtcaggaacaggaggagaggcagaggaggatg
agcaagaaggctatgaaaatgctcaaaaagagacaaacacaaacctcgtcaccaacacac
gaacaaacaggacaatgtgaaattccctactggaccaactactcaaaatggcgaatgtcc
ttgcactccattgtgactagcaagtactttgacctcgcaattgctggggtcatcgggttc
aatgtcatttcgatggccatggagttctacatgatgcccaaagagctggagcaaacgttg
aagatctttaacttcttcttcacatccatcttcgtgttggaggcgggggtcaaggttgtg
tcatatggggcgttcagatatctatcagacagatggaaccagttggatgtgagcatcatc
atcatgtccattgccggcatcatcctcgaggaggtgacgtcacaaaactttcccatcacc
cccaccatcatcagagtcatgagggttttgaggatagctagagtgctgaaattgttgaaa
atggcgaaatcagttcgtgccctgttggatacggtggtgcaagctctcccagaggtcgcc
aacctcggtctcctcttctttctgctcttcttcatcttcgctgctctcggagtcgagcta
ttcggcagagttgagtgctcggaccagtttccttgcgagggcctgggaaggcatgcccac
ttcaaaaactttgggatggccttcctcacactcttccggatcgcaactggagataactgg
aatggaatcatgaaagacacgttgagagaggagtgcgactcatctgaggattgcgtgaga
aactgctgcgtcaacaagatcattgcccccatcttcttcgtcgtctttgtcctcatggcc
cagttcgttctcgtcaacgtcgttgtggcggttctcatgaaacatttggaggtcattcgt
atgtttcaattcactgttcacgtacatgatgcagaaattgtcctacagaaattaattata
aattaa
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integrated database retrieval system
