Helobdella robusta: HELRODRAFT_66730
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Entry
HELRODRAFT_66730 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hro04040
]
HELRODRAFT_66730
Ion channels [BR:
hro04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
HELRODRAFT_66730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
20213946
NCBI-ProteinID:
XP_009022460
JGI:
Helro1_66730
UniProt:
T1FYP8
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MSEDGEWNSLGVGVVRKEVDLTPLEKQFLYAVERGDIPTVQKLLNDNANKLNFNSNCVDA
LGRTALAISIEYDNIEMLDVLLKGRLDLGDSLLQAINEDNVEATQMILNHEKKLQKQDIT
GNNSCFTPDITPIILAAQRDNYEITKILLDRGDSISKPHDIRCSCDICVTKTAEDSLNHS
MSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSKLENELKIEYEGLAKQCQNFAV
DLLDQVRGSKELEVLLNYDKYAPVRDFGDRMALARLKLAIKYKQKKFVSHANCQQLLASI
WYEGLLGFRRRHIIFKVLLTIIVSLLFPILSLIYIISPKSQAGQFMRRPFIKFICHSASY
MTFLSLLILASQRIKSIISLAKEADDKSTKMIREVRGAPPTSIEWMILAYVAEGLVWAEI
KQLWDQGLKSYVHDMWNILDFTTNSLYIATYTLKLVAYLKVEEEKRNNYPSAYADRKSWD
AYDPTLISEGLFASANIFSCLKLIYIFTVNPHLGPLQISLGRMVIDILKFLFIALLVCFS
YSCGVNQLYWYYAEVKSRECSVCEANKVNITSLLNANINKSVLGVMSLTTKFCHNSLFEI
IQTLYFAIYGLVELNKFELKEKHIFTQFVGKLMFGTYLSIMTVVLINMLIAMLSSSFQKI
SDDADTEWKFARSRLWMSYFEEGGTVPTPFNIIPTPKTFWYLGKWMFDRLCRFSTKAKTN
KWHSLKRAVKRMQERDVVYQSVIFDLVKRYVMKRQKKTSEGVTEDNVNELKQDLSSFRYE
LLDILRSNGMNVPKPSLNSSGNQCR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagatggtgagtggaacagtttgggagtgggtgtggtcagaaaggaggtggac
ctgacacctctcgagaaacagttcctctacgctgtcgagaggggtgacattccaactgtc
cagaaacttctcaacgacaacgccaacaaattgaacttcaacagcaactgcgtggacgcg
ctgggccgaacggctctggccatatccatcgagtatgataacattgagatgctcgatgtt
ctcttgaagggacgactcgatttaggcgactcgctgctacaggcgatcaatgaggacaac
gtggaggccacacagatgatcctcaaccacgagaagaagctgcagaaacaagacataaca
ggcaacaatagctgcttcacacccgacataactccaatcatcttggctgctcaacgtgac
aactatgaaataacaaaaatccttttagacagaggcgacagcatctcgaagccacacgac
atcagatgcagttgcgacatctgcgtcacgaaaacggcagaggacagtttgaaccactcg
atgtcgaggatcaacgcctacagagccctagccagtccctccctcatcgccctctccagc
aaggaccccatcctgactgcctttgagttgagctgggagctaaggagactgagcaaactt
gagaatgaattaaaaatcgaatacgaaggactagcgaaacagtgtcagaacttcgcagtg
gatctactggaccaggtgcgaggatccaaggagttggaggtcctccttaactacgacaag
tatgcacctgtaagggacttcggggaccgcatggctctcgctcgcctcaaactggccatc
aaatacaaacaaaaaaaattcgtcagtcatgcaaactgccagcagctgttggcgtccatc
tggtacgaggggctgctgggtttcaggagacgccacatcatcttcaaggtcctactgacg
ataatcgtcagcttgttgtttcccatcctctccctcatctacatcatctctccgaagagc
caggccggacagttcatgcgcagacctttcatcaagttcatctgccacagtgcttcttac
atgacttttctcagcttactgatcctggcctcacaaaggatcaagtccatcatcagcctg
gccaaggaagcagacgacaaatccacgaagatgattcgcgaggtcagaggcgcccctccg
accagcattgagtggatgatccttgcttacgtcgctgaaggcctagtctgggcagaaata
aagcagctgtgggaccaaggtttaaaatcgtatgtgcacgacatgtggaacattctcgac
ttcacaaccaactccctctacattgccacttacactttgaaactagttgcctatttgaaa
gttgaagaggagaaacgaaacaactacccatctgcctatgctgaccgcaaatcgtgggac
gcctacgaccccactctcatctccgagggtctttttgcaagtgccaacattttcagttgc
ctcaaacttatttacatcttcacggtcaatcctcatctcggaccattgcaaatatctctt
ggcaggatggtcattgacattttaaaatttctcttcatagctcttctcgtctgtttctca
tactcttgcggagttaatcaattgtactggtactacgccgaggtgaagagtcgagagtgt
agtgtctgtgaggccaacaaggtgaacattacgtcactcctcaatgcaaacatcaacaaa
agtgtcttgggtgttatgtcgttaacaacaaaattttgccacaacagcttattcgaaata
attcaaaccctgtactttgccatatatggcctggtggagttgaacaaatttgaactgaaa
gagaaacacatattcacccagttcgtcgggaagttgatgtttggaacgtacctgagcatc
atgactgtcgtcctcatcaacatgctcatcgccatgcttagcagctcctttcagaaaatt
tccgatgacgccgacacagaatggaagttcgcaagatctcgactgtggatgagttatttt
gaggagggtgggacggtgccaaccccattcaacatcattcccactcccaaaacattctgg
tacctcggaaagtggatgtttgatcggctctgcaggttcagcacaaaagcaaagacaaac
aaatggcacagcttgaagagggcggtgaagaggatgcaggagagggacgttgtgtatcag
tcagttatattcgacctcgtaaagcgctacgtgatgaagcgtcagaagaaaacatcggaa
ggtgtgactgaagacaacgtgaacgagttgaagcaggacctctcttcattcagatacgaa
cttcttgatattttgaggtccaatggaatgaacgtgcccaagccgagtctcaactccagc
ggcaatcaatgtcgttag
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