Helobdella robusta: HELRODRAFT_68312
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Entry
HELRODRAFT_68312 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hro
Helobdella robusta
Pathway
hro00100
Steroid biosynthesis
hro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HELRODRAFT_68312
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hro01006
]
HELRODRAFT_68312
Enzymes [BR:
hro01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HELRODRAFT_68312
Prenyltransferases [BR:
hro01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HELRODRAFT_68312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Med31
Motif
Other DBs
NCBI-GeneID:
20214177
NCBI-ProteinID:
XP_009025212
JGI:
Helro1_68312
UniProt:
T1FZC9
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
SSGMKTCYEFLKKTSRSFYAVIEMLNPEIKDAMCLFYLVLRALDTVEDDMTIEKSLKIKL
LSQFHKFLYAESWNFTKSCSNDRIVLENFSVISKEFRHLNKKYREIISKICMKMGKGMIK
FSNSSPQSLKELDEYCHYVAGLVGIGCTSLFTSSGLETNNIKLTTDISNSLGLFLQKTNI
IRDYLEDVNQNRYFWPKQVWSKYVENIEYFSKPEFSREALQCLNELITNALAHVSDVINY
LSAISDESVFRFTAIPQVMAIATLERCYNNVLLFNGVVKIRKGEAICLMNEATNITKVKL
IFMRYLNKIRYRITARDPSAIQTMREVERAMQICNPNNCERTSTSFKEICICCIILAISF
LFVCWRCSVLI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
tcaagcggcatgaagacttgttacgagtttttaaaaaagacaagcagatcattttacgca
gttatcgaaatgttgaatcccgaaataaaagatgcaatgtgtctgttctacttggttctc
agagccttggacactgtagaagatgatatgactatagagaaaagtttgaagattaaatta
ctttcacaatttcacaaatttttgtacgctgaaagctggaattttacaaaaagctgcagt
aacgaccgaattgtgttagaaaatttctccgtgatttccaaagagttcagacacttaaat
aagaaatatcgcgagattattagcaagatatgcatgaaaatgggcaaaggaatgatcaag
ttctcgaactcttcacctcaaagtctcaaagagttggatgagtactgccattatgtagct
ggcttggttggcattggttgcacttccttgttcactagctccggcctggaaacaaacaac
atcaaacttacaacagacatttccaattctctgggattatttttgcagaaaacaaatata
atcagggattatttggaggatgttaatcaaaaccgatatttttggcccaaacaggtttgg
agcaaatatgtcgaaaatatagaatacttcagtaagccagagttttctagagaagcgctt
cagtgtttaaatgaactcattacaaatgctttggctcatgtcagtgatgttataaactat
ctgtcggcaatcagtgacgagtccgtgtttcgattcactgccataccacaggtgatggca
atagccacgttggaaagatgctacaacaacgtgttgttgtttaatggagttgttaagatc
agaaaaggagaagccatttgtctgatgaacgaagcaacaaacattacgaaagttaagctc
atatttatgcgctatttaaataaaattcgctacagaattactgcaagagatccttcagcc
attcaaaccatgcgagaagttgaaagagcgatgcaaatttgcaatcccaacaattgcgaa
aggacatcgacatcttttaaagaaatttgcatatgttgtatcattctcgcaatttcgttt
ttgtttgtttgttggagatgtagcgttttgatttag
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