KEGG   Helobdella robusta: HELRODRAFT_71969
Entry
HELRODRAFT_71969  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
hro  Helobdella robusta
Pathway
hro03018  RNA degradation
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_71969
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HELRODRAFT_71969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_71969
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_71969
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HELRODRAFT_71969
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     HELRODRAFT_71969
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    HELRODRAFT_71969
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF150_C
Other DBs
NCBI-GeneID: 20214685
NCBI-ProteinID: XP_009010958
JGI: Helro1_71969
UniProt: T1G0T7
LinkDB
Position
Unknown
AA seq 88 aa
MSLANPSQLLPLELVDKCIGSKIHIIMKNEKEIVGTLLGFDDFVNMVLEDVTEFETTPEG
RRITKLERILLNGNNITMLIPGGEGPDA
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtctctcgcaaatccgtctcaactcctgccactagaattagtggacaagtgcattggg
tccaaaattcacataattatgaaaaatgaaaaagaaattgttggaactctgcttgggttt
gatgattttgtcaatatggtcctagaggatgttacagaatttgaaaccactccagagggc
cgtcgaataactaaactggaacgaattttactcaatgggaataacataaccatgttgatt
cctggcggggaaggccctgatgcctag

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