Helobdella robusta: HELRODRAFT_81148
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Entry
HELRODRAFT_81148 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_81148
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
HELRODRAFT_81148
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HELRODRAFT_81148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Annexin
FR47
Motif
Other DBs
NCBI-GeneID:
20215900
NCBI-ProteinID:
XP_009019048
JGI:
Helro1_81148
UniProt:
T1G4A2
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
YCPGGPDSDFEYSSQSYTGYEPTSMRAIRARYDPYLQTRHRIEQLKQLGHNVDKVEFIVM
GGTFMSLNEEYRNYFIRSLHDALSGHTSGSVEEAIKYSERSVTRCVGITIETRPDYCLKK
HLSDMLGYGCTRLEIGTQSIYEDVAKDTNRGHTVKAVCESFEMAKNAGFKVVSHMMPDLP
NIGMERDIHQFVEFFENPLFRPDGMKLYPTLVIRGTGLYELWKSGRYKSYSPNLLVDLIA
RILALVPPWTRVYRVQRDIPMPLVSSGVERGNLRELALARIQDLGNRCRDIRTREVGIQE
IHSKVKPYETELIRRDYVANGGWETFLAYEDPHQDILIGLLRLRKCSNTFRTELKESCSL
VRELHVYGSVVPVNLRDSTKFQHQGFGMLLMEEAERIAVNEHGSSKIAVISGVGTRNYYR
KIGYELEGPYMTKLLSFS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
tactgtccaggtgggcctgattcagattttgaatacagcagtcaatcatacactggctac
gagccaacttccatgagagcaatcagagcgagatatgatccataccttcaaacaaggcat
agaattgaacagttgaaacagttaggtcacaatgtggacaaagtagagtttatcgtgatg
ggtggcacttttatgtccttgaatgaagaatacagaaattattttatcagaagtttgcat
gatgcgttgtctggtcatacaagtggatcagtagaagaagctataaagtattctgaacgc
agtgtcacacgatgcgttggcattaccatagaaaccaggcccgattactgtttaaaaaaa
catttatctgatatgctaggatatggatgtaccagacttgaaattggaacacaaagcata
tatgaagatgttgctaaagacacgaacagaggacacactgtgaaagctgtttgtgaatca
tttgaaatggctaaaaatgccggtttcaaggtcgtatcccatatgatgcctgacttgccc
aatattggcatggaaagagacattcatcaatttgtcgagttttttgaaaatccattattt
cgtcccgatggtatgaaattatatccaacgctagtgattcgaggcacaggcttatacgaa
ctatggaaaagtggtcgatacaaaagttattctcccaatttactcgttgatctaattgcc
aggatactagctctggtgccgccatggacgagggtttacagagttcaaagagacatacca
atgccgttagtaagttctggagttgaacgtggcaacctccgagagttagccctagcacgt
atacaagatttaggcaacagatgtcgagacataagaactcgagaagtaggcatacaagaa
atacacagcaaagtcaaaccatacgagactgagttgattcgtagagattatgtggcaaat
ggcggttgggaaacattcttagcatacgaagatcctcatcaagacattctgatcggttta
ttgcgacttagaaagtgttcaaatactttcagaaccgaattgaaagaatcgtgttcttta
gtgagagagttacatgtttacggaagcgtggtgccagttaatttgagagactctactaag
tttcaacatcagggattcggaatgttgttgatggaagaagctgaacggattgcagtaaat
gagcatggatcatcaaaaattgctgtcatatctggtgtggggacgagaaattattatcga
aaaatcggttatgaattggaagggccttacatgaccaaattattatctttttcataa
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