KEGG   Helobdella robusta: HELRODRAFT_85938
Entry
HELRODRAFT_85938  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
hro  Helobdella robusta
Pathway
hro03020  RNA polymerase
hro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HELRODRAFT_85938
  09124 Replication and repair
   03420 Nucleotide excision repair
    HELRODRAFT_85938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hro03021]
    HELRODRAFT_85938
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_85938
Transcription machinery [BR:hro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     HELRODRAFT_85938
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HELRODRAFT_85938
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 20216544
NCBI-ProteinID: XP_009024924
JGI: Helro1_85938
UniProt: T1G647
LinkDB
Position
Unknown
AA seq 273 aa
MPYANQPTVSVTELTDENIKFVLENTDLSVANSIRRVCIAETPTLAIDWIQIESNSTVLC
DEFIAQRIGLIPLTSDDVVDKMQYPRDCSCEEFCPECAVEFSLDVRCTDDQTKHVHTGHL
ISSNPKVVPATSRHRDEDGDYGDNEEILIVKLRKGQELKLRAVAIKGFAKEHAKWNPTAG
VAFEYDPDNEFKHTVYPKPEEWPKSEFSELPENVHEAPFNYQSKPHKFYMNIESCGSLKP
ENILMTSLSVLKKKLSDLQIQLSQEIQGDALAI
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccttatgctaaccagcccacagtttcagttactgagttgacagatgaaaatatcaaa
tttgtattggagaatacagatttaagtgttgccaactcaattagaagagtatgcattgcg
gaaactccaacactggcaatcgattggatccaaattgaatcaaattcaactgtactgtgt
gatgaattcatagcacagcgaataggattgataccgctgacatccgacgacgttgtcgat
aagatgcagtacccgagggattgcagttgtgaagaattttgtcccgaatgtgcagttgaa
ttttctctcgatgtcaggtgcacagacgatcaaacaaaacacgttcacacaggtcatttg
atcagcagcaatccaaaagttgtcccggcaacttccagacacagagatgaagacggagac
tatggcgacaatgaagaaatacttatagtcaagttgagaaaaggacaagaattaaagttg
cgtgcagttgcaatcaaaggttttgcaaaggagcatgctaaatggaatccaactgctgga
gtggcgtttgaatatgatcctgacaatgagttcaagcatactgtctaccctaaacctgaa
gaatggccaaaaagcgaattttcagaacttccagaaaacgtccatgaagctccattcaac
tatcagtcaaaaccacacaaattctacatgaacattgaatcctgtggctccctaaaacct
gaaaacattctcatgacgtcgttaagcgttttaaagaaaaaattgagtgatttacaaatt
cagttgagtcaagaaatccaaggagacgctcttgcaatatga

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