Helobdella robusta: HELRODRAFT_85938
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Entry
HELRODRAFT_85938 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
hro
Helobdella robusta
Pathway
hro03020
RNA polymerase
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HELRODRAFT_85938
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_85938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_85938
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_85938
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
HELRODRAFT_85938
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
HELRODRAFT_85938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
20216544
NCBI-ProteinID:
XP_009024924
JGI:
Helro1_85938
UniProt:
T1G647
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MPYANQPTVSVTELTDENIKFVLENTDLSVANSIRRVCIAETPTLAIDWIQIESNSTVLC
DEFIAQRIGLIPLTSDDVVDKMQYPRDCSCEEFCPECAVEFSLDVRCTDDQTKHVHTGHL
ISSNPKVVPATSRHRDEDGDYGDNEEILIVKLRKGQELKLRAVAIKGFAKEHAKWNPTAG
VAFEYDPDNEFKHTVYPKPEEWPKSEFSELPENVHEAPFNYQSKPHKFYMNIESCGSLKP
ENILMTSLSVLKKKLSDLQIQLSQEIQGDALAI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgctaaccagcccacagtttcagttactgagttgacagatgaaaatatcaaa
tttgtattggagaatacagatttaagtgttgccaactcaattagaagagtatgcattgcg
gaaactccaacactggcaatcgattggatccaaattgaatcaaattcaactgtactgtgt
gatgaattcatagcacagcgaataggattgataccgctgacatccgacgacgttgtcgat
aagatgcagtacccgagggattgcagttgtgaagaattttgtcccgaatgtgcagttgaa
ttttctctcgatgtcaggtgcacagacgatcaaacaaaacacgttcacacaggtcatttg
atcagcagcaatccaaaagttgtcccggcaacttccagacacagagatgaagacggagac
tatggcgacaatgaagaaatacttatagtcaagttgagaaaaggacaagaattaaagttg
cgtgcagttgcaatcaaaggttttgcaaaggagcatgctaaatggaatccaactgctgga
gtggcgtttgaatatgatcctgacaatgagttcaagcatactgtctaccctaaacctgaa
gaatggccaaaaagcgaattttcagaacttccagaaaacgtccatgaagctccattcaac
tatcagtcaaaaccacacaaattctacatgaacattgaatcctgtggctccctaaaacct
gaaaacattctcatgacgtcgttaagcgttttaaagaaaaaattgagtgatttacaaatt
cagttgagtcaagaaatccaaggagacgctcttgcaatatga
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integrated database retrieval system